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KM550_gp1 polyprotein [ Pineapple bacilliform ER virus ]

Gene ID: 65101083, updated on 1-Aug-2022

Summary

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Gene symbol
KM550_gp1
Gene description
polyprotein
Locus tag
KM550_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pineapple bacilliform ER virus (acronym: PBCErV, nat-host: Ananas comosus var. erectifolius)
Lineage
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Badnavirus
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Genomic context

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Location:
clone: pAlucsc
Sequence:
NC_055237.1 (1..545)

NC_055237.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_055237.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of viral and non-viral reverse transcribing elements in pineapple (Ananas comosus), including members of two new badnavirus species. Gambley CF, et al. Arch Virol, 2008. PMID 18607672

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
polyprotein
YP_010085996.1
  • contains reverse transcriptase and RNaseH; ORF3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_055237.1 Reference assembly

    Range
    1..545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010085996.1 polyprotein, partial [Pineapple bacilliform ER virus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B4Y9U4
    Conserved Domains (1) summary
    cd01647
    Location:1 → 75
    RT_LTR; Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the replication of ...
Nucleotide Protein
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