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KM718_gp3 polyprotein [ Polyscias mosaic virus ]

Gene ID: 65102906, updated on 1-Aug-2022

Summary

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Gene symbol
KM718_gp3
Gene description
polyprotein
Locus tag
KM718_gp3
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Polyscias mosaic virus (isolate: AR3, nat-host: Polyscias fruticosa cv. Ming aralia)
Lineage
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Badnavirus
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Genomic context

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Sequence:
NC_055562.1 (1164..7136)

NC_055562.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_055562.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of a previously undescribed badnavirus occurring in Polyscias fruticosa L. (Ming aralia). Alvarez-Quinto RA, et al. Arch Virol, 2019 Sep. PMID 31165927

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
polyprotein
YP_010087614.1
  • contains movement protein, coat protein, aspartic protease, reverse transcriptase and RNAse H; ORF3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_055562.1 Reference assembly

    Range
    1164..7136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010087614.1 polyprotein [Polyscias mosaic virus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A481SAG3
    Conserved Domains (5) summary
    smart00343
    Location:965 → 981
    ZnF_C2HC; zinc finger
    cd01647
    Location:1514 → 1698
    RT_LTR; Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the replication of ...
    TIGR02169
    Location:1154 → 1294
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    pfam13650
    Location:1299 → 1394
    Asp_protease_2; Aspartyl protease
    cl14782
    Location:1798 → 1925
    RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8
Nucleotide Protein
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