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CKS1BP6 CDC28 protein kinase regulatory subunit 1B pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 652904, updated on 17-Sep-2024

Summary

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Official Symbol
CKS1BP6provided by HGNC
Official Full Name
CDC28 protein kinase regulatory subunit 1B pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:24608
See related
AllianceGenome:HGNC:24608
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See CKS1BP6 in Genome Data Viewer
Location:
Xp21.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (30617392..30618164)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (30209480..30210252)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (30635509..30636281)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:30326716-30327216 Neighboring gene NR0B1 5' regulatory region Neighboring gene nuclear receptor subfamily 0 group B member 1 Neighboring gene NANOG hESC enhancer GRCh37_chrX:30472541-30473099 Neighboring gene NANOG hESC enhancer GRCh37_chrX:30517192-30517733 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29508 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20724 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29509 Neighboring gene TLR adaptor interacting with endolysosomal SLC15A4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20725 Neighboring gene ferritin light chain pseudogene 2 Neighboring gene glycerol kinase Neighboring gene GK antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012762.2 

    Range
    101..873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    30617392..30618164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    30209480..30210252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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