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Fbxo36 F-box protein 36 [ Mus musculus (house mouse) ]

Gene ID: 66153, updated on 2-Nov-2024

Summary

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Official Symbol
Fbxo36provided by MGI
Official Full Name
F-box protein 36provided by MGI
Primary source
MGI:MGI:1289192
See related
Ensembl:ENSMUSG00000073633 AllianceGenome:MGI:1289192
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D1Ertd757e; 0610008D19Rik; 1110020F21Rik; 2410002G19Rik
Summary
Orthologous to human FBXO36 (F-box protein 36). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 36.3), kidney adult (RPKM 5.2) and 5 other tissues See more
Orthologs
human all
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Genomic context

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See Fbxo36 in Genome Data Viewer
Location:
1 C5; 1 43.43 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (84817562..84878208)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (84839841..84900487)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene delta/notch-like EGF repeat containing Neighboring gene STARR-seq mESC enhancer starr_01515 Neighboring gene predicted gene, 57795 Neighboring gene microRNA 5126 Neighboring gene predicted gene, 51637 Neighboring gene thyroid hormone receptor interactor 12 Neighboring gene STARR-seq mESC enhancer starr_01519 Neighboring gene STARR-seq mESC enhancer starr_01525 Neighboring gene STARR-seq mESC enhancer starr_01531 Neighboring gene solute carrier family 16 (monocarboxylic acid transporters), member 14 Neighboring gene predicted gene, 39669 Neighboring gene predicted pseudogene 15433

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Systematic analysis and nomenclature of mammalian F-box proteins. Jin J, et al. Genes Dev, 2004 Nov 1. PMID 15520277, Free PMC Article
  2. Database resources of the National Center for Biotechnology Information. Wheeler DL, et al. Nucleic Acids Res, 2001 Jan 1. PMID 11125038, Free PMC Article
  3. High-throughput discovery of novel developmental phenotypes. Dickinson ME, et al. Nature, 2016 Sep 22. PMID 27626380, Free PMC Article
  4. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  5. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
F-box only protein 36

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025386.3 → NP_079662.1  F-box only protein 36

    See identical proteins and their annotated locations for NP_079662.1

    Status: VALIDATED

    Source sequence(s)
    AU019733, BC049581, BY096703, BY708252
    Consensus CDS
    CCDS35634.1
    UniProtKB/Swiss-Prot
    Q9CQ24
    Related
    ENSMUSP00000095276.4, ENSMUST00000097672.4
    Conserved Domains (1) summary
    pfam12937
    Location:94 → 140
    F-box-like; F-box-like

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    84817562..84878208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006496520.3 → XP_006496583.1  F-box only protein 36 isoform X1

    Conserved Domains (1) summary
    pfam12937
    Location:73 → 117
    F-box-like
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9CQ24.1 GenPept UniProtKB/Swiss-Prot:Q9CQ24

Gene LinkOut

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