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Tmsb15b1 thymosin beta 15b1 [ Mus musculus (house mouse) ]

Gene ID: 666244, updated on 2-Nov-2024

Summary

Official Symbol
Tmsb15b1provided by MGI
Official Full Name
thymosin beta 15b1provided by MGI
Primary source
MGI:MGI:3843059
See related
Ensembl:ENSMUSG00000089768 AllianceGenome:MGI:3843059
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tm15b
Summary
This gene is part of tandem duplication; the other copy of this gene is about 1.5 kb away. Readthrough transcripts that include two exons transcribed from each gene exist. [provided by RefSeq, Jul 2008]
Expression
Broad expression in CNS E18 (RPKM 9.8), CNS E14 (RPKM 7.6) and 16 other tissues See more
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Genomic context

See Tmsb15b1 in Genome Data Viewer
Location:
X F1; X 59.1 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (135874771..135877623, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (136974022..136976874, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene glycogen synthase kinase 3 alpha pseudogene Neighboring gene thymosin beta 15b2 Neighboring gene thymosin beta 15b like Neighboring gene solute carrier family 25, member 53 Neighboring gene zinc finger, CCHC domain containing 18 Neighboring gene vacuolar ATPase assembly integral membrane protein Vma21 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47980 Neighboring gene family with sequence similarity 199, X-linked

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Readthrough Tmsb15l

Readthrough gene: Tmsb15l, Included gene: Tmsb15b2

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables actin monomer binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in regulation of cell migration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sequestering of actin monomers IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081983.1NP_001075452.1  thymosin beta-like

    Status: VALIDATED

    Source sequence(s)
    AL672008
    Consensus CDS
    CCDS41139.1
    UniProtKB/TrEMBL
    A2AF33
    Related
    ENSMUSP00000108694.2, ENSMUST00000113071.2
    Conserved Domains (1) summary
    pfam01290
    Location:341
    Thymosin; Thymosin beta-4 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    135874771..135877623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)