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Gm11787 predicted gene 11787 [ Mus musculus (house mouse) ]

Gene ID: 666513, updated on 17-Aug-2024

Summary

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Official Symbol
Gm11787provided by MGI
Official Full Name
predicted gene 11787provided by MGI
Primary source
MGI:MGI:3702103
See related
AllianceGenome:MGI:3702103
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in spleen adult (RPKM 12.8), lung adult (RPKM 7.2) and 25 other tissues See more
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Genomic context

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See Gm11787 in Genome Data Viewer
Location:
4 A1; 4 1.95 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (3496884..3511900, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (3496884..3511900, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 6 pseudogene Neighboring gene STARR-seq mESC enhancer starr_09407 Neighboring gene STARR-seq mESC enhancer starr_09409 Neighboring gene spermatogenesis associated glutamate (E)-rich protein 4d pseudogene Neighboring gene STARR-seq mESC enhancer starr_09411 Neighboring gene STARR-seq mESC enhancer starr_09412 Neighboring gene STARR-seq mESC enhancer starr_09413 Neighboring gene microRNA 3471-2 Neighboring gene transmembrane protein 68

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_165837.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL732617

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    3496884..3511900 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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