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Cfap97 cilia and flagella associated protein 97 [ Mus musculus (house mouse) ]

Gene ID: 66756, updated on 2-Nov-2024

Summary

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Official Symbol
Cfap97provided by MGI
Official Full Name
cilia and flagella associated protein 97provided by MGI
Primary source
MGI:MGI:1914006
See related
Ensembl:ENSMUSG00000031631 AllianceGenome:MGI:1914006
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Kiaa1430; 1110068E21Rik; 4933411K20Rik
Summary
Predicted to be involved in spermatogenesis. Orthologous to human CFAP97 (cilia and flagella associated protein 97). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in testis adult (RPKM 30.1), limb E14.5 (RPKM 4.2) and 22 other tissues See more
Orthologs
human all
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Genomic context

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See Cfap97 in Genome Data Viewer
Location:
8 B1.1; 8 26.16 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (46615515..46648627)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (46162095..46195590)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene Lrp2 binding protein Neighboring gene sorting nexin 25 Neighboring gene STARR-seq mESC enhancer starr_21377 Neighboring gene STARR-positive B cell enhancer ABC_E10497 Neighboring gene predicted gene 15634 Neighboring gene STARR-positive B cell enhancer ABC_E10498 Neighboring gene solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 Neighboring gene actin, gamma, pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, et al. DNA Res, 2003 Aug 31. PMID 14621295
  2. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article
  3. BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. Magdaleno S, et al. PLoS Biol, 2006 Apr. PMID 16602821, Free PMC Article
  4. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  5. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in spermatogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
cilia- and flagella-associated protein 97

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357215.2 → NP_001344144.1  cilia- and flagella-associated protein 97 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC114558, AC156551
    Consensus CDS
    CCDS22288.1
    UniProtKB/Swiss-Prot
    Q6ZPR1, Q9D462
    UniProtKB/TrEMBL
    E9Q1K1
    Conserved Domains (1) summary
    pfam13879
    Location:353 → 455
    KIAA1430; KIAA1430 homolog

  2. NM_001357216.2 → NP_001344145.1  cilia- and flagella-associated protein 97 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC114558, AC156551
    Consensus CDS
    CCDS22288.1
    UniProtKB/Swiss-Prot
    Q6ZPR1, Q9D462
    UniProtKB/TrEMBL
    E9Q1K1
    Conserved Domains (1) summary
    pfam13879
    Location:353 → 455
    KIAA1430; KIAA1430 homolog

  3. NM_001428466.1 → NP_001415395.1  cilia- and flagella-associated protein 97 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC114558, AC156551
    UniProtKB/Swiss-Prot
    Q6ZPR1, Q9D462

  4. NM_001428467.1 → NP_001415396.1  cilia- and flagella-associated protein 97 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC114558, AC156551
    UniProtKB/Swiss-Prot
    Q6ZPR1, Q9D462

  5. NM_001428468.1 → NP_001415397.1  cilia- and flagella-associated protein 97 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC114558, AC156551
    UniProtKB/Swiss-Prot
    Q6ZPR1, Q9D462

  6. NM_001428469.1 → NP_001415398.1  cilia- and flagella-associated protein 97 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC114558, AC156551
    UniProtKB/Swiss-Prot
    Q6ZPR1, Q9D462

  7. NM_001428470.1 → NP_001415399.1  cilia- and flagella-associated protein 97 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC114558, AC156551

  8. NM_025747.5 → NP_080023.1  cilia- and flagella-associated protein 97 isoform 1

    See identical proteins and their annotated locations for NP_080023.1

    Status: VALIDATED

    Source sequence(s)
    AC114558, AC156551
    Consensus CDS
    CCDS22288.1
    UniProtKB/Swiss-Prot
    Q6ZPR1, Q9D462
    UniProtKB/TrEMBL
    E9Q1K1
    Related
    ENSMUSP00000034048.7, ENSMUST00000034048.13
    Conserved Domains (1) summary
    pfam13879
    Location:353 → 455
    KIAA1430; KIAA1430 homolog

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    46615515..46648627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006509478.5 → XP_006509541.1  cilia- and flagella-associated protein 97 isoform X1

    Conserved Domains (1) summary
    pfam13879
    Location:353 → 455
    KIAA1430; KIAA1430 homolog

  2. XM_006509479.4 → XP_006509542.1  cilia- and flagella-associated protein 97 isoform X1

    Conserved Domains (1) summary
    pfam13879
    Location:353 → 455
    KIAA1430; KIAA1430 homolog

  3. XM_006509477.5 → XP_006509540.1  cilia- and flagella-associated protein 97 isoform X1

    Related
    ENSMUSP00000106005.2, ENSMUST00000110376.8
    Conserved Domains (1) summary
    pfam13879
    Location:353 → 455
    KIAA1430; KIAA1430 homolog
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6ZPR1.2 GenPept UniProtKB/Swiss-Prot:Q6ZPR1

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