U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rpsD 30S ribosomal protein S4 [ Pantoea agglomerans ]

Gene ID: 66824437, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
rpsD
Gene description
30S ribosomal protein S4
Locus tag
I6L77_RS04635
Gene type
protein coding
Organism
Pantoea agglomerans (strain: FDAARGOS 1447, culture-collection: DSM:3493, type-material: type strain of Pantoea agglomerans)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group
Old locus tag
I6L77_04635
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP077366.1Genomic Context describing neighboring genes Neighboring gene 30S ribosomal protein S13 Neighboring gene 30S ribosomal protein S11 Neighboring gene DNA-directed RNA polymerase subunit alpha Neighboring gene 50S ribosomal protein L17

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP077366.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient. Humphrey J, et al. Microbiol Resour Announc, 2019 Jan. PMID 30637402, Free PMC Article
  2. Recognition of 16S rRNA by ribosomal protein S4 from Bacillus stearothermophilus. Gerstner RB, et al. Biochemistry, 2001 Jun 19. PMID 11401563
  3. The rpsD gene, encoding ribosomal protein S4, is autogenously regulated in Bacillus subtilis. Grundy FJ, et al. J Bacteriol, 1991 Aug. PMID 1906866, Free PMC Article
  4. Cloning and analysis of the Bacillus subtilis rpsD gene, encoding ribosomal protein S4. Grundy FJ, et al. J Bacteriol, 1990 Nov. PMID 1699930, Free PMC Article
  5. Characterization of the Bacillus subtilis rpsD regulatory target site. Grundy FJ, et al. J Bacteriol, 1992 Nov. PMID 1400226, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
30S ribosomal protein S4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP077366.1 Reference assembly

    Range
    1015178..1015798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_008927131.1 MULTISPECIES: 30S ribosomal protein S4 [Pantoea]

    See identical proteins and their annotated locations for WP_008927131.1

    UniProtKB/TrEMBL
    A0A1I5I5T0, A0A1X1BSV8, A0A2A7V889, A0A2V1YNL1, A0A506PU58, A0A5M7KZB3, A0A5M7PWM9, A0A653NZM5, A0A6I4V8M0, A0AAD2SNG7, A0AAF0R854, A0AAN1NM94, A0AAN4Y629, A0AAP6JV30, A0AAQ3ILC2, E0M4S5
    Conserved Domains (1) summary
    PRK05327
    Location:1 → 206
    rpsD; 30S ribosomal protein S4; Validated
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases