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I8G32_RS24985 HD domain-containing phosphohydrolase [ Rhodopseudomonas palustris ]

Gene ID: 66895992, updated on 6-Jun-2024

Summary

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Gene symbol
I8G32_RS24985
Gene description
HD domain-containing phosphohydrolase
Locus tag
I8G32_RS24985
Gene type
protein coding
Organism
Rhodopseudomonas palustris (strain: RCB100)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Rhodopseudomonas
Old locus tag
I8G32_04995
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Genomic context

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NZ_CP066699.1Genomic Context describing neighboring genes Neighboring gene DUF3551 domain-containing protein Neighboring gene AMP-binding protein Neighboring gene hypothetical protein Neighboring gene dienelactone hydrolase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP066699.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence Conservation, Domain Architectures, and Phylogenetic Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases. Galperin MY, et al. J Bacteriol, 2022 Apr 19. PMID 34928179, Free PMC Article
  2. The HD domain defines a new superfamily of metal-dependent phosphohydrolases. Aravind L, et al. Trends Biochem Sci, 1998 Dec. PMID 9868367

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
HD domain-containing phosphohydrolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP066699.1 Reference assembly

    Range
    5442553..5443656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012497922.1 HD domain-containing phosphohydrolase [Rhodopseudomonas palustris]

    See identical proteins and their annotated locations for WP_012497922.1

    UniProtKB/TrEMBL
    A0AAF0BTY8, Q6N0D3
    Conserved Domains (2) summary
    COG0745
    Location:60 → 148
    OmpR; DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]
    COG2206
    Location:170 → 361
    HDGYP; HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant) [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

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