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Actl11 actin-like 11 [ Mus musculus (house mouse) ]

Gene ID: 67722, updated on 2-Nov-2024

Summary

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Official Symbol
Actl11provided by MGI
Official Full Name
actin-like 11provided by MGI
Primary source
MGI:MGI:1914972
See related
Ensembl:ENSMUSG00000066368 AllianceGenome:MGI:1914972
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4921517D21Rik
Summary
Predicted to be active in actin cytoskeleton. Orthologous to human ACTL11P (actin like 11, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Actl11 in Genome Data Viewer
Location:
9 F1; 9 59.07 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (107805668..107809660)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (107928469..107932461)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23856 Neighboring gene macrophage stimulating 1 receptor (c-met-related tyrosine kinase) Neighboring gene CaM kinase-like vesicle-associated Neighboring gene TRAF-interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic variation in Mon1a affects protein trafficking and modifies macrophage iron loading in mice. Wang F, et al. Nat Genet, 2007 Aug. PMID 17632513
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC141498

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC67722

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026338.3 → NP_080614.1  uncharacterized protein LOC67722

    See identical proteins and their annotated locations for NP_080614.1

    Status: VALIDATED

    Source sequence(s)
    AL731808
    Consensus CDS
    CCDS23510.1
    UniProtKB/TrEMBL
    Q14BL3, Q9D5V1
    Related
    ENSMUSP00000082150.2, ENSMUST00000085073.2
    Conserved Domains (2) summary
    pfam00022
    Location:860 → 1205
    Actin; Actin
    cl17037
    Location:860 → 1204
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    107805668..107809660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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