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rplY 50S ribosomal protein L25 [ Pectobacterium aroidearum ]

Gene ID: 67793639, updated on 31-Mar-2023

Summary

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Gene symbol
rplY
Gene description
50S ribosomal protein L25
Locus tag
I2D83_RS09040
Gene type
protein coding
Organism
Pectobacterium aroidearum (strain: L6, nat-host: Syngonium podophyllum)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
Old locus tag
I2D83_09040
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Genomic context

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NZ_CP065044.1Genomic Context describing neighboring genes Neighboring gene nucleoid-associated protein YejK Neighboring gene DUF1624 domain-containing protein Neighboring gene DEAD/DEAH box helicase Neighboring gene YecH family metal-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP065044.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins. Fedorov R, et al. Acta Crystallogr D Biol Crystallogr, 2001 Jul. PMID 11418764
  2. The crucial role of conserved intermolecular H-bonds inaccessible to the solvent in formation and stabilization of the TL5.5 SrRNA complex. Gongadze GM, et al. J Biol Chem, 2005 Apr 22. PMID 15718233
  3. Cloning, characterization, and physical location of the rplY gene which encodes ribosomal protein L25 in Escherichia coli K12. Uemura Y, et al. Mol Gen Genet, 1991 Apr. PMID 2034228
  4. Structure of Escherichia coli ribosomal protein L25 complexed with a 5S rRNA fragment at 1.8-A resolution. Lu M, et al. Proc Natl Acad Sci U S A, 2000 Feb 29. PMID 10696113, Free PMC Article
  5. The NMR structure of Escherichia coli ribosomal protein L25 shows homology to general stress proteins and glutaminyl-tRNA synthetases. Stoldt M, et al. EMBO J, 1998 Nov 2. PMID 9799245, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
50S ribosomal protein L25

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP065044.1 Reference assembly

    Range
    2001922..2002206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015839897.1 MULTISPECIES: 50S ribosomal protein L25 [Pectobacterium]

    See identical proteins and their annotated locations for WP_015839897.1

    UniProtKB/Swiss-Prot
    C6DEJ2
    UniProtKB/TrEMBL
    A0A7W2E0G9
    Conserved Domains (1) summary
    PRK05943
    Location:1 → 94
    PRK05943; 50S ribosomal protein L25; Reviewed
Nucleotide Protein
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