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Kiaa0232 KIAA0232 homolog [ Rattus norvegicus (Norway rat) ]

Gene ID: 680039, updated on 2-Nov-2024

Summary

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Official Symbol
Kiaa0232provided by RGD
Official Full Name
KIAA0232 homologprovided by RGD
Primary source
RGD:1596848
See related
EnsemblRapid:ENSRNOG00000027623 AllianceGenome:RGD:1596848
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human KIAA0232 (KIAA0232). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Heart (RPKM 231.7), Brain (RPKM 214.9) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Kiaa0232 in Genome Data Viewer
Location:
14q21
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (78318660..78384012)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (74094421..74159316)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (79261052..79325916)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103693769 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 4 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene uncharacterized LOC120096639 Neighboring gene TBC1 domain family, member 14 Neighboring gene selenoprotein K, pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Phosphorylation and degradation of tomosyn-2 de-represses insulin secretion. Bhatnagar S, et al. J Biol Chem, 2014 Sep 5. PMID 25002582, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
uncharacterized protein KIAA0232 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109388.1 → NP_001102858.1  uncharacterized protein KIAA0232 homolog

    See identical proteins and their annotated locations for NP_001102858.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473963
    UniProtKB/TrEMBL
    A0A8I5ZZU8, A6IJX9, D3ZYT3
    Related
    ENSRNOP00000032427.4, ENSRNOT00000029191.8
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1302
    DUF4603; Domain of unknown function (DUF4603)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    78318660..78384012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006251140.5 → XP_006251202.1  uncharacterized protein KIAA0232 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8I5ZZU8, A0A8I6A9Y3
    Related
    ENSRNOP00000089487.1, ENSRNOT00000104509.2
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1325
    DUF4603; Domain of unknown function (DUF4603)

  2. XM_039092426.2 → XP_038948354.1  uncharacterized protein KIAA0232 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8I5ZV02, A0A8I5ZZU8
    Related
    ENSRNOP00000109328.1, ENSRNOT00000161148.1
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1302
    DUF4603; Domain of unknown function (DUF4603)

  3. XM_006251141.5 → XP_006251203.1  uncharacterized protein KIAA0232 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8I5ZZU8
    Conserved Domains (1) summary
    pfam15376
    Location:23 → 1325
    DUF4603; Domain of unknown function (DUF4603)
Nucleotide Protein Strain
Heading Accession and Version

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