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Rup2l1 urinary protein 2 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 680406, updated on 17-Aug-2024

Summary

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Official Symbol
Rup2l1provided by RGD
Official Full Name
urinary protein 2 like 1provided by RGD
Primary source
RGD:1591793
See related
EnsemblRapid:ENSRNOG00000084687 AllianceGenome:RGD:1591793
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Restricted expression toward (RPKM 11174.6) See more
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Genomic context

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See Rup2l1 in Genome Data Viewer
Location:
8q21
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (43696629..43700306, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (35485521..35489142, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (37702229..37705043, complement)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120094112 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene PDZ domain containing 4, pseudogene 1 Neighboring gene PDZ domain-containing protein 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
urinary protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    43696629..43700306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039082300.2 → XP_038938228.1  urinary protein 2-like

    UniProtKB/TrEMBL
    M0R7P3
    Related
    ENSRNOP00000111117.1, ENSRNOT00000122112.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials