U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Golm1 golgi membrane protein 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 680692, updated on 10-Jul-2024

Summary

Go to the top of the page Help
Official Symbol
Golm1provided by RGD
Official Full Name
golgi membrane protein 1provided by RGD
Primary source
RGD:1589384
See related
EnsemblRapid:ENSRNOG00000018400 AllianceGenome:RGD:1589384
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to act upstream of or within nucleus organization and regulation of lipid metabolic process. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human GOLM1 (golgi membrane protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Heart (RPKM 192.6), Kidney (RPKM 163.6) and 9 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Golm1 in Genome Data Viewer
Location:
17p14
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (4996978..5049278)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (4995925..5044329)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (5373095..5411186)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene SPATA31 subfamily D, member 3 Neighboring gene similar to human chromosome 9 open reading frame 153 Neighboring gene uncharacterized LOC134482661 Neighboring gene N(alpha)-acetyltransferase 35, NatC auxiliary subunit Neighboring gene serine/arginine repetitive matrix protein 3-like Neighboring gene ATP/GTP binding carboxypeptidase 1 Neighboring gene uncharacterized LOC134482764

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Decreased survival and hepato-renal pathology in mice with C-terminally truncated GP73 (GOLPH2). Wright LM, et al. Int J Clin Exp Pathol, 2009. PMID 18830387, Free PMC Article
  2. Human colostrum: identification of minor proteins in the aqueous phase by proteomics. Palmer DJ, et al. Proteomics, 2006 Apr. PMID 16502470
  3. Proteomic analysis of podocyte exosome-enriched fraction from normal human urine. Prunotto M, et al. J Proteomics, 2013 Apr 26. PMID 23376485
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Golgi Protein 73 Promotes LPS-Induced Cardiac Dysfunction via Mediating Myocardial Apoptosis and Autophagy.
    Title: Golgi Protein 73 Promotes LPS-Induced Cardiac Dysfunction via Mediating Myocardial Apoptosis and Autophagy.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
acts_upstream_of_or_within nucleus organization ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within regulation of lipid metabolic process ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Golgi membrane protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001427411.2 → NP_001414340.1  Golgi membrane protein 1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000017
    UniProtKB/TrEMBL
    A0A8I5ZPY1, D4AEL2
    Related
    ENSRNOP00000110202.1, ENSRNOT00000128517.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    4996978..5049278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039096415.2 → XP_038952343.2  Golgi membrane protein 1 isoform X1

    Related
    ENSRNOP00000103374.1, ENSRNOT00000159656.1

  2. XM_039096416.2 → XP_038952344.1  Golgi membrane protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I5ZPY1, D4AEL2
    Conserved Domains (1) summary
    COG1196
    Location:41 → 218
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_039096417.2 → XP_038952345.1  Golgi membrane protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I5ZPY1, D4AEL2
    Conserved Domains (1) summary
    COG1196
    Location:41 → 218
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_063276736.1 → XP_063132806.1  Golgi membrane protein 1 isoform X2

    Related
    ENSRNOP00000080545.2, ENSRNOT00000115015.2

RNA

  1. XR_005495817.2 RNA Sequence

  2. XR_005495818.2 RNA Sequence

  3. XR_010058935.1 RNA Sequence

  4. XR_010058934.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools
Miscellaneous