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Tmem234 transmembrane protein 234 [ Rattus norvegicus (Norway rat) ]

Gene ID: 682404, updated on 2-Nov-2024

Summary

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Official Symbol
Tmem234provided by RGD
Official Full Name
transmembrane protein 234provided by RGD
Primary source
RGD:1583487
See related
EnsemblRapid:ENSRNOG00000049326 AllianceGenome:RGD:1583487
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be located in membrane. Orthologous to human TMEM234 (transmembrane protein 234). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 37.8), Lung (RPKM 33.1) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Tmem234 in Genome Data Viewer
Location:
5q36
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (147226887..147235367)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (141942591..141951047)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (147803890..147812186)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120102985 Neighboring gene LCK proto-oncogene, Src family tyrosine kinase Neighboring gene family with sequence similarity 167, member B Neighboring gene eukaryotic translation initiation factor 3, subunit I Neighboring gene doublecortin domain containing 2B Neighboring gene uncharacterized LOC108351039 Neighboring gene IQ motif containing C Neighboring gene coiled coil domain containing 28B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 234

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001399192.1 → NP_001386121.1  transmembrane protein 234 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000005
    UniProtKB/TrEMBL
    A6ISK2
    Conserved Domains (1) summary
    pfam10639
    Location:18 → 126
    TMEM234; Putative transmembrane family 234

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    147226887..147235367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039111252.2 → XP_038967180.1  transmembrane protein 234 isoform X1

    UniProtKB/TrEMBL
    M0R8F2
    Related
    ENSRNOP00000065748.2, ENSRNOT00000074235.4
    Conserved Domains (1) summary
    pfam10639
    Location:18 → 150
    TMEM234; Putative transmembrane family 234

  2. XM_063288400.1 → XP_063144470.1  transmembrane protein 234 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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