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Rps2-ps42 ribosomal protein S2, pseudogene 42 [ Rattus norvegicus (Norway rat) ]

Gene ID: 688473, updated on 2-Nov-2024

Summary

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Official Symbol
Rps2-ps42provided by RGD
Official Full Name
ribosomal protein S2, pseudogene 42provided by RGD
Primary source
RGD:1588815
See related
AllianceGenome:RGD:1588815
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Rps2l2
Summary
Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be part of small ribosomal subunit. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Rps2-ps42 in Genome Data Viewer
Location:
8q22
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (48935904..48936601, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (40038718..40039422, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (43479932..43480636, complement)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 10 subfamily N member 7 Neighboring gene olfactory receptor family 10 subfamily D member 1B Neighboring gene olfactory receptor family 8 subfamily G member 52 Neighboring gene olfactory receptor pseudogene 1317

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
small ribosomal subunit protein uS5-like
Names
40S ribosomal protein S2 pseudogene
40S ribosomal protein S2-like
ribosomal protein S2 like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    48935904..48936601 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039082870.2 → XP_038938798.1  small ribosomal subunit protein uS5-like

    UniProtKB/TrEMBL
    A0A8J8XHT4, D3ZAS1, D3ZIY7, G3V957
    Conserved Domains (1) summary
    PTZ00070
    Location:2 → 201
    PTZ00070; 40S ribosomal protein S2; Provisional
Nucleotide Protein Strain
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