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Serpina1fl1 serpin family A member 1F like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 690319, updated on 2-Nov-2024

Summary

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Official Symbol
Serpina1fl1provided by RGD
Official Full Name
serpin family A member 1F like 1provided by RGD
Primary source
RGD:1597369
See related
AllianceGenome:RGD:1597369
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of peptidase activity. Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Liver (RPKM 4.9), Lung (RPKM 4.0) and 3 other tissues See more
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Genomic context

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See Serpina1fl1 in Genome Data Viewer
Location:
6q32
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (128611592..128623601, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (122846808..122858814, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (127590734..127608412, complement)

Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16 Neighboring gene serpin family A member 1F Neighboring gene serpin family A member 1F like 2 Neighboring gene serpin family A member 1 Neighboring gene uncharacterized LOC134479253

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in negative regulation of peptidase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
alpha-1-antitrypsin-related protein-like
Names
alpha-1-antiproteinase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086024.1 Reference GRCr8

    Range
    128611592..128623601 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039113356.2 → XP_038969284.1  alpha-1-antitrypsin-related protein-like

    UniProtKB/TrEMBL
    A0A8I6A8Z3
    Conserved Domains (1) summary
    cd19550
    Location:51 → 413
    serpinA2_PIL; serpin family A member 2, protease inhibitor 1-like

  2. XM_039113355.2 → XP_038969283.1  alpha-1-antitrypsin-related protein-like

    UniProtKB/TrEMBL
    A0A8I6A8Z3
    Conserved Domains (1) summary
    cd19550
    Location:51 → 413
    serpinA2_PIL; serpin family A member 2, protease inhibitor 1-like
Nucleotide Protein Strain
Heading Accession and Version

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