U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GQR93_RS03405 YbaK/EbsC family protein [ Lentilactobacillus hilgardii ]

Gene ID: 69057404, updated on 20-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
GQR93_RS03405
Gene description
YbaK/EbsC family protein
Locus tag
GQR93_RS03405
Gene type
protein coding
Organism
Lentilactobacillus hilgardii (strain: FLUB)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus
Old locus tag
GQR93_03405
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP047121.1Genomic Context describing neighboring genes Neighboring gene TetR/AcrR family transcriptional regulator Neighboring gene hypothetical protein Neighboring gene sigma-70 family RNA polymerase sigma factor Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP047121.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Substrate-mediated fidelity mechanism ensures accurate decoding of proline codons. So BR, et al. J Biol Chem, 2011 Sep 9. PMID 21768119, Free PMC Article
  2. The bacterial YbaK protein is a Cys-tRNAPro and Cys-tRNA Cys deacylase. Ruan B, et al. J Biol Chem, 2005 Jul 8. PMID 15886196
  3. Trans-editing of mischarged tRNAs. Ahel I, et al. Proc Natl Acad Sci U S A, 2003 Dec 23. PMID 14663147, Free PMC Article
  4. Cys-tRNA(Pro) editing by Haemophilus influenzae YbaK via a novel synthetase.YbaK.tRNA ternary complex. An S, et al. J Biol Chem, 2005 Oct 14. PMID 16087664
  5. Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications. Zhang H, et al. Proteins, 2000 Jul 1. PMID 10813833

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
YbaK/EbsC family protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP047121.1 Reference assembly

    Range
    736417..736902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003552276.1 YbaK/EbsC family protein [Lentilactobacillus hilgardii]

    See identical proteins and their annotated locations for WP_003552276.1

    UniProtKB/TrEMBL
    A0A6P1E9C6
    Conserved Domains (1) summary
    cl00022
    Location:6 → 160
    YbaK_like; YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, ProX, and PrdX. The primary function of INS is to hydrolyze ...
Nucleotide Protein
Heading Accession and Version