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GQR93_RS09130 YfbR-like 5'-deoxynucleotidase [ Lentilactobacillus hilgardii ]

Gene ID: 69058528, updated on 20-Nov-2023

Summary

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Gene symbol
GQR93_RS09130
Gene description
YfbR-like 5'-deoxynucleotidase
Locus tag
GQR93_RS09130
Gene type
protein coding
Organism
Lentilactobacillus hilgardii (strain: FLUB)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus
Old locus tag
GQR93_09130
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Genomic context

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NZ_CP047121.1Genomic Context describing neighboring genes Neighboring gene excinuclease ABC subunit UvrA Neighboring gene excinuclease ABC subunit UvrB Neighboring gene thioredoxin-disulfide reductase Neighboring gene UTP--glucose-1-phosphate uridylyltransferase GalU

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP047121.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The deoxycytidine pathway for thymidylate synthesis in Escherichia coli. Weiss B. J Bacteriol, 2007 Nov. PMID 17827303, Free PMC Article
  2. Structural insight into the mechanism of substrate specificity and catalytic activity of an HD-domain phosphohydrolase: the 5'-deoxyribonucleotidase YfbR from Escherichia coli. Zimmerman MD, et al. J Mol Biol, 2008 Apr 18. PMID 18353368, Free PMC Article
  3. A widespread pathway for substitution of adenine by diaminopurine in phage genomes. Zhou Y, et al. Science, 2021 Apr 30. PMID 33926954
  4. Enzyme genomics: Application of general enzymatic screens to discover new enzymes. Kuznetsova E, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808744
  5. General enzymatic screens identify three new nucleotidases in Escherichia coli. Biochemical characterization of SurE, YfbR, and YjjG. Proudfoot M, et al. J Biol Chem, 2004 Dec 24. PMID 15489502

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
YfbR-like 5'-deoxynucleotidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP047121.1 Reference assembly

    Range
    1942572..1943219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003554567.1 YfbR-like 5'-deoxynucleotidase [Lentilactobacillus hilgardii]

    See identical proteins and their annotated locations for WP_003554567.1

    UniProtKB/TrEMBL
    A0A6P1EAT6, C0XMQ2
    Conserved Domains (1) summary
    cl21469
    Location:6 → 189
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
Nucleotide Protein
Heading Accession and Version