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Prr14 proline rich 14 [ Rattus norvegicus (Norway rat) ]

Gene ID: 691898, updated on 10-Oct-2024

Summary

Symbol
Prr14provided by RGD
Full Name
proline rich 14provided by RGD
Primary source
RGD:1594592
See related
EnsemblRapid:ENSRNOG00000018518 AllianceGenome:RGD:1594592
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Mecp2; MECP2_e1; AABR07005779.1
Summary
Predicted to be located in nucleoplasm. Orthologous to human PRR14 (proline rich 14). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Thymus (RPKM 85.6), Lung (RPKM 64.4) and 9 other tissues See more
Orthologs
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Genomic context

See Prr14 in Genome Data Viewer
Location:
1q37
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (191514428..191519805)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (182083838..182089330)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (198910994..198915473)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit ATP5MPL, mitochondrial-like Neighboring gene zinc finger protein 689 Neighboring gene fibrosin Neighboring gene uncharacterized LOC120099937

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
proline-rich protein 14
Names
methyl CpG binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001401701.1NP_001388630.1  proline-rich protein 14

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    D3ZWF4
    Related
    ENSRNOP00000051884.4, ENSRNOT00000055002.5

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    191514428..191519805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063274926.1XP_063130996.1  proline-rich protein 14 isoform X1

    UniProtKB/TrEMBL
    D3ZWF4