U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BGRP1 beta-1,3-glucan recognition protein 1 [ Bombyx mori (domestic silkworm) ]

Gene ID: 692379, updated on 9-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
BGRP1
Gene description
beta-1,3-glucan recognition protein 1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Also known as
BGBP; GNBP3; betaGRP
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BGRP1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 11 NC_085117.1 (7760804..7774518)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 11 NC_051368.1 (7357705..7371419)

Chromosome 11 - NC_085117.1Genomic Context describing neighboring genes Neighboring gene elongation of very long chain fatty acids protein 7 Neighboring gene GTP-binding protein REM 1 Neighboring gene beta-1,3-glucan recognition protein 3 Neighboring gene beta-1,3-glucan recognition protein 2 Neighboring gene secretory pathway calcium atpase Neighboring gene uncharacterized LOC134199620

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A low-cost affinity purification system using β-1,3-glucan recognition protein and curdlan beads. Horiuchi M, et al. Protein Eng Des Sel, 2012 Aug. PMID 22706764, Free PMC Article
  2. Solution structure of the silkworm betaGRP/GNBP3 N-terminal domain reveals the mechanism for beta-1,3-glucan-specific recognition. Takahasi K, et al. Proc Natl Acad Sci U S A, 2009 Jul 14. PMID 19561300, Free PMC Article
  3. A pattern-recognition protein for beta-1,3-glucan. The binding domain and the cDNA cloning of beta-1,3-glucan recognition protein from the silkworm, Bombyx mori. Ochiai M, et al. J Biol Chem, 2000 Feb 18. PMID 10671539
  4. Purification of a beta-1,3-glucan recognition protein in the prophenoloxidase activating system from hemolymph of the silkworm, Bombyx mori. Ochiai M, et al. J Biol Chem, 1988 Aug 25. PMID 3136171
  5. A genome-wide analysis of genes and gene families involved in innate immunity of Bombyx mori. Tanaka H, et al. Insect Biochem Mol Biol, 2008 Dec. PMID 18835443

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. We report here an affinity purification system named the 'GRP system', which uses the association between the beta-1,3-glucan recognition domain of betaGRP (GRP-tag), as an affinity tag, and curdlan beads.
    Title: A low-cost affinity purification system using β-1,3-glucan recognition protein and curdlan beads.
  2. betaGRP is a beta-1,3-glucan-recognition protein that specifically recognizes a triple-helical structure of beta-1,3-glucan.
    Title: Solution structure of the silkworm betaGRP/GNBP3 N-terminal domain reveals the mechanism for beta-1,3-glucan-specific recognition.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,3-glucan-binding protein
Names
gram-negative bacteria-binding protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001043375.1 → NP_001036840.1  beta-1,3-glucan-binding protein precursor

    See identical proteins and their annotated locations for NP_001036840.1

    Status: PROVISIONAL

    Source sequence(s)
    AB026441
    UniProtKB/Swiss-Prot
    Q9NL89
    Conserved Domains (2) summary
    cd02179
    Location:185 → 494
    GH16_beta_GRP; beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16
    pfam15886
    Location:20 → 122
    CBM39; Carbohydrate binding domain (family 32)

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085117.1 Reference ASM3026992v2 Primary Assembly

    Range
    7760804..7774518
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9NL89.1 GenPept UniProtKB/Swiss-Prot:Q9NL89

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials