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UBLCP1 ubiquitin like domain containing CTD phosphatase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 694476, updated on 17-Aug-2024

Summary

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Official Symbol
UBLCP1provided by VGNC
Official Full Name
ubiquitin like domain containing CTD phosphatase 1provided by VGNC
Primary source
VGNC:VGNC:79684
See related
Ensembl:ENSMMUG00000021700
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See UBLCP1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (156682857..156703999)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (157438492..157459630)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 145 Neighboring gene small nucleolar RNA SNORA68 Neighboring gene U4atac minor spliceosomal RNA Neighboring gene uncharacterized LOC106999016 Neighboring gene interleukin 12B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-like domain-containing CTD phosphatase 1
NP_001253320.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266391.1 → NP_001253320.1  ubiquitin-like domain-containing CTD phosphatase 1

    See identical proteins and their annotated locations for NP_001253320.1

    Status: PROVISIONAL

    Source sequence(s)
    JV044165
    UniProtKB/TrEMBL
    F6VI02, F7EZZ1
    Related
    ENSMMUP00000033782.1, ENSMMUT00000040752.3
    Conserved Domains (2) summary
    TIGR02245
    Location:117 → 311
    HAD_IIID1; HAD-superfamily subfamily IIID hydrolase, TIGR02245
    cd01813
    Location:3 → 77
    Ubl_UBLCP1; ubiquitin-like (Ubl) domain found in ubiquitin-like domain-containing CTD phosphatase 1 (UBLCP1) and similar proteins

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    156682857..156703999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials