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Hjv hemojuvelin BMP co-receptor [ Mus musculus (house mouse) ]

Gene ID: 69585, updated on 28-Oct-2024

Summary

Official Symbol
Hjvprovided by MGI
Official Full Name
hemojuvelin BMP co-receptorprovided by MGI
Primary source
MGI:MGI:1916835
See related
Ensembl:ENSMUSG00000038403 AllianceGenome:MGI:1916835
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
DL-M; Hfe2; Rgmc; hemojuvelin; 2310035L15Rik; 5230400G09Rik
Summary
Enables BMP binding activity and coreceptor activity. Involved in intracellular iron ion homeostasis and negative regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including BMP signaling pathway; multicellular organismal-level iron ion homeostasis; and negative regulation of BMP signaling pathway. Located in cell surface and extracellular space. Is expressed in several structures, including gonad; musculature; submandibular gland; trunk mesenchyme; and yolk sac. Used to study hemochromatosis type 2A. Human ortholog(s) of this gene implicated in hemochromatosis and hemochromatosis type 2A. Orthologous to human HJV (hemojuvelin BMP co-receptor). [provided by Alliance of Genome Resources, Oct 2024]
Expression
Biased expression in heart adult (RPKM 77.5), liver adult (RPKM 38.7) and 4 other tissues See more
Orthologs
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Genomic context

See Hjv in Genome Data Viewer
Location:
3 F2.1; 3 41.91 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96432479..96436532)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96525163..96529216)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2088 Neighboring gene STARR-positive B cell enhancer ABC_E4562 Neighboring gene nuclear encoded tRNA glutamic acid 13 (anticodon CTC) Neighboring gene STARR-seq mESC enhancer starr_08437 Neighboring gene predicted gene, 40100 Neighboring gene STARR-positive B cell enhancer mm9_chr3:96351291-96351592 Neighboring gene STARR-positive B cell enhancer ABC_E6082 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:96361830-96361983 Neighboring gene STARR-seq mESC enhancer starr_08439 Neighboring gene predicted gene 15441 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:96368663-96368826 Neighboring gene thioredoxin interacting protein Neighboring gene STARR-seq mESC enhancer starr_08441 Neighboring gene STARR-positive B cell enhancer ABC_E6083 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide G like Neighboring gene STARR-seq mESC enhancer starr_08442 Neighboring gene STARR-positive B cell enhancer ABC_E3451

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (6)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables BMP binding IDA
Inferred from Direct Assay
more info
PubMed 
enables BMP binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables BMP binding ISO
Inferred from Sequence Orthology
more info
 
enables BMP receptor activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to BMP receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables coreceptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables coreceptor activity IGI
Inferred from Genetic Interaction
more info
PubMed 
enables coreceptor activity ISO
Inferred from Sequence Orthology
more info
 
enables signaling receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables transferrin receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables transferrin receptor binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in BMP signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within BMP signaling pathway IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within BMP signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in BMP signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in activin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in activin receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to BMP stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular iron ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within multicellular organismal-level iron ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within multicellular organismal-level iron ion homeostasis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within negative regulation of BMP signaling pathway IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in negative regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in protein autoprocessing IEA
Inferred from Electronic Annotation
more info
 
involved_in protein autoprocessing ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of BMP receptor complex IEA
Inferred from Electronic Annotation
more info
 
part_of BMP receptor complex ISO
Inferred from Sequence Orthology
more info
 
part_of HFE-transferrin receptor complex IEA
Inferred from Electronic Annotation
more info
 
part_of HFE-transferrin receptor complex ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
part_of plasma membrane protein complex ISO
Inferred from Sequence Orthology
more info
 
located_in side of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
hemojuvelin
Names
RGM domain family member C
hemochromatosis type 2 (juvenile) (human homolog)
hemochromatosis type 2 protein homolog
hemojuvelin BMP coreceptor
repulsive guidance molecule C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001429153.1NP_001416082.1  hemojuvelin precursor

    Status: VALIDATED

    Source sequence(s)
    AC122037
    UniProtKB/Swiss-Prot
    Q7TQ32, Q8CEU7, Q8K1D4, Q9D741
  2. NM_027126.5NP_081402.3  hemojuvelin precursor

    See identical proteins and their annotated locations for NP_081402.3

    Status: VALIDATED

    Source sequence(s)
    AC122037
    Consensus CDS
    CCDS51003.1
    UniProtKB/Swiss-Prot
    Q7TQ32, Q8CEU7, Q8K1D4, Q9D741
    Related
    ENSMUSP00000046659.10, ENSMUST00000049208.11
    Conserved Domains (2) summary
    pfam06534
    Location:223381
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:34218
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    96432479..96436532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036163296.1XP_036019189.1  hemojuvelin isoform X1

    UniProtKB/Swiss-Prot
    Q7TQ32, Q8CEU7, Q8K1D4, Q9D741
    Conserved Domains (2) summary
    pfam06534
    Location:223381
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:34218
    RGM_N; Repulsive guidance molecule (RGM) N-terminus
  2. XM_006502037.3XP_006502100.1  hemojuvelin isoform X1

    Conserved Domains (2) summary
    pfam06534
    Location:223381
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:34218
    RGM_N; Repulsive guidance molecule (RGM) N-terminus