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HSPD1 heat shock protein family D (Hsp60) member 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 698024, updated on 5-Mar-2024

Summary

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Gene symbol
HSPD1
Gene description
heat shock protein family D (Hsp60) member 1
See related
Ensembl:ENSMMUG00000010489
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
Hsp60
Orthologs
human mouse all
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Genomic context

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See HSPD1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (84597521..84613404, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (148894053..148909938)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3b subunit 1 Neighboring gene methylmalonyl-CoA epimerase, mitochondrial-like Neighboring gene coenzyme Q10B Neighboring gene heat shock protein family E (Hsp10) member 1 Neighboring gene MOB family member 4, phocein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic mitochondrial changes IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of interferon-alpha production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of interleukin-6 production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of type II interferon production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60 kDa heat shock protein, mitochondrial
Names
chaperonin
heat shock 60 kDa protein
heat shock 60kDa protein 1 (chaperonin)
NP_001182445.1
XP_014987219.1
XP_014987220.1
XP_014987221.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195516.1 → NP_001182445.1  60 kDa heat shock protein, mitochondrial

    See identical proteins and their annotated locations for NP_001182445.1

    Status: PROVISIONAL

    Source sequence(s)
    CB309252, CN641365, CN648285, CO580527
    UniProtKB/TrEMBL
    F7BGB7, H9FTU5, H9H3I6, H9H3L6, H9Z8E7
    Related
    ENSMMUP00000017129.4, ENSMMUT00000018298.4
    Conserved Domains (2) summary
    PTZ00114
    Location:24 → 555
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:28 → 548
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    84597521..84613404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015131734.1 → XP_014987220.1  60 kDa heat shock protein, mitochondrial isoform X1

    UniProtKB/TrEMBL
    F7BGB7, H9FTU5, H9H3I6, H9H3L6, H9Z8E7
    Related
    ENSMMUP00000013745.3, ENSMMUT00000014673.4
    Conserved Domains (2) summary
    PTZ00114
    Location:24 → 555
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:28 → 548
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...

  2. XM_015131733.2 → XP_014987219.1  60 kDa heat shock protein, mitochondrial isoform X1

    UniProtKB/TrEMBL
    F7BGB7, H9FTU5, H9H3I6, H9H3L6, H9Z8E7
    Related
    ENSMMUP00000015578.4, ENSMMUT00000016629.4
    Conserved Domains (2) summary
    PTZ00114
    Location:24 → 555
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:28 → 548
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...

  3. XM_015131735.1 → XP_014987221.1  60 kDa heat shock protein, mitochondrial isoform X1

    UniProtKB/TrEMBL
    F7BGB7, H9FTU5, H9H3I6, H9H3L6, H9Z8E7
    Conserved Domains (2) summary
    PTZ00114
    Location:24 → 555
    PTZ00114; Heat shock protein 60; Provisional
    cd03344
    Location:28 → 548
    GroEL; GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found ...
Nucleotide Protein
Heading Accession and Version

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