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BBOX1 gamma-butyrobetaine hydroxylase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 699465, updated on 17-Aug-2024

Summary

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Official Symbol
BBOX1provided by VGNC
Official Full Name
gamma-butyrobetaine hydroxylase 1provided by VGNC
Primary source
VGNC:VGNC:70233
See related
Ensembl:ENSMMUG00000000316
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See BBOX1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (38317544..38409320, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (38828649..38862724, complement)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672300 Neighboring gene coiled-coil domain containing 34 Neighboring gene cTAGE family member 8-like Neighboring gene ETS domain-containing protein Elk-1-like Neighboring gene uncharacterized LOC106993302 Neighboring gene fin bud initiation factor homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-butyrobetaine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-butyrobetaine dioxygenase
Names
butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    38317544..38409320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028833552.1 → XP_028689385.1  gamma-butyrobetaine dioxygenase

    UniProtKB/TrEMBL
    A0A1D5QZI5, F6YUX3, G7NDQ1, H9EWA6
    Related
    ENSMMUP00000053467.2, ENSMMUT00000067959.2
    Conserved Domains (1) summary
    TIGR02409
    Location:16 → 381
    carnitine_bodg; gamma-butyrobetaine hydroxylase

  2. XM_015114605.2 → XP_014970091.2  gamma-butyrobetaine dioxygenase

    UniProtKB/TrEMBL
    A0A1D5QZI5, F6YUX3, G7NDQ1, H9EWA6
    Related
    ENSMMUP00000000428.3, ENSMMUT00000000461.4
    Conserved Domains (1) summary
    TIGR02409
    Location:16 → 381
    carnitine_bodg; gamma-butyrobetaine hydroxylase

  3. XM_028833554.1 → XP_028689387.1  gamma-butyrobetaine dioxygenase

    UniProtKB/TrEMBL
    A0A1D5QZI5, F6YUX3, G7NDQ1, H9EWA6
    Conserved Domains (1) summary
    TIGR02409
    Location:16 → 381
    carnitine_bodg; gamma-butyrobetaine hydroxylase

  4. XM_028833553.1 → XP_028689386.1  gamma-butyrobetaine dioxygenase

    UniProtKB/TrEMBL
    A0A1D5QZI5, F6YUX3, G7NDQ1, H9EWA6
    Conserved Domains (1) summary
    TIGR02409
    Location:16 → 381
    carnitine_bodg; gamma-butyrobetaine hydroxylase
Nucleotide Protein
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