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NFYB nuclear transcription factor Y subunit beta [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700451, updated on 17-Aug-2024

Summary

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Official Symbol
NFYBprovided by VGNC
Official Full Name
nuclear transcription factor Y subunit betaprovided by VGNC
Primary source
VGNC:VGNC:97795
See related
Ensembl:ENSMMUG00000022570
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See NFYB in Genome Data Viewer
Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (103823416..103845311, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (104034659..104055906, complement)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene glycosyltransferase 8 domain containing 2 Neighboring gene host cell factor C2 Neighboring gene small nuclear ribonucleoprotein F-like Neighboring gene translation initiation factor IF-2-like Neighboring gene 60S ribosomal protein L9-like Neighboring gene 60S ribosomal protein L28 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCAAT-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit beta
Names
nuclear transcription factor Y, beta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257720.1 → NP_001244649.1  nuclear transcription factor Y subunit beta

    See identical proteins and their annotated locations for NP_001244649.1

    Status: PROVISIONAL

    Source sequence(s)
    JU334673
    UniProtKB/TrEMBL
    A0A1D5Q0C9, A0A5F8AQT3
    Related
    ENSMMUP00000041491.1, ENSMMUT00000056242.2
    Conserved Domains (1) summary
    pfam00808
    Location:57 → 122
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    103823416..103845311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015152549.2 → XP_015008035.1  nuclear transcription factor Y subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A5F8AQT3, F6ZKY2
    Related
    ENSMMUP00000029708.4, ENSMMUT00000031753.4
    Conserved Domains (1) summary
    pfam00808
    Location:58 → 123
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

  2. XM_015152552.2 → XP_015008038.1  nuclear transcription factor Y subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A1D5Q0C9, A0A5F8AQT3
    Conserved Domains (1) summary
    pfam00808
    Location:57 → 122
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

  3. XM_015152553.2 → XP_015008039.1  nuclear transcription factor Y subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A1D5Q0C9, A0A5F8AQT3
    Conserved Domains (1) summary
    pfam00808
    Location:57 → 122
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

  4. XM_015152550.2 → XP_015008036.1  nuclear transcription factor Y subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A5F8AQT3, F6ZKY2
    Conserved Domains (1) summary
    pfam00808
    Location:58 → 123
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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