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PUM2 pumilio RNA binding family member 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 701782, updated on 17-Aug-2024

Summary

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Official Symbol
PUM2provided by VGNC
Official Full Name
pumilio RNA binding family member 2provided by VGNC
Primary source
VGNC:VGNC:76480
Locus tag
EGK_05087
See related
Ensembl:ENSMMUG00000023181
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PUM2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (88652492..88757647)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (20212206..20317638, complement)

Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992857 Neighboring gene uncharacterized LOC106992858 Neighboring gene ras homolog family member B Neighboring gene developmentally-regulated GTP-binding protein 1-like Neighboring gene syndecan 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pumilio homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041766.1 Reference Mmul_10 Primary Assembly

    Range
    88652492..88757647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028831946.1 → XP_028687779.1  pumilio homolog 2 isoform X2

    UniProtKB/TrEMBL
    F7EJC5, H9FS08, H9Z701
    Related
    ENSMMUP00000058227.2, ENSMMUT00000076973.2
    Conserved Domains (1) summary
    cd07920
    Location:722 → 1043
    Pumilio; Pumilio-family RNA binding domain

  2. XM_028831948.1 → XP_028687781.1  pumilio homolog 2 isoform X5

    UniProtKB/TrEMBL
    F7EJB5, H9Z701
    Conserved Domains (1) summary
    cd07920
    Location:643 → 964
    Pumilio; Pumilio-family RNA binding domain

  3. XM_015111782.2 → XP_014967268.1  pumilio homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XRA1, G7N9G9, H9FS07, H9Z701
    Conserved Domains (1) summary
    cd07920
    Location:722 → 1045
    Pumilio; Pumilio-family RNA binding domain

  4. XM_015111783.2 → XP_014967269.1  pumilio homolog 2 isoform X2

    UniProtKB/TrEMBL
    F7EJC5, H9FS08, H9Z701
    Related
    ENSMMUP00000030510.3, ENSMMUT00000032605.4
    Conserved Domains (1) summary
    cd07920
    Location:722 → 1043
    Pumilio; Pumilio-family RNA binding domain

  5. XM_015111788.2 → XP_014967274.1  pumilio homolog 2 isoform X5

    UniProtKB/TrEMBL
    F7EJB5, H9Z701
    Related
    ENSMMUP00000030511.3, ENSMMUT00000032606.4
    Conserved Domains (1) summary
    cd07920
    Location:643 → 964
    Pumilio; Pumilio-family RNA binding domain

  6. XM_015111789.2 → XP_014967275.1  pumilio homolog 2 isoform X6

    UniProtKB/TrEMBL
    H9Z701
    Conserved Domains (1) summary
    cd07920
    Location:587 → 908
    Pumilio; Pumilio-family RNA binding domain

  7. XM_015111781.2 → XP_014967267.1  pumilio homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A8J8XRA1, G7N9G9, H9FS07, H9Z701
    Conserved Domains (1) summary
    cd07920
    Location:722 → 1045
    Pumilio; Pumilio-family RNA binding domain

  8. XM_015111787.2 → XP_014967273.1  pumilio homolog 2 isoform X4

    UniProtKB/TrEMBL
    H9Z701
    Conserved Domains (1) summary
    cd07920
    Location:643 → 966
    Pumilio; Pumilio-family RNA binding domain

  9. XM_028831949.1 → XP_028687782.1  pumilio homolog 2 isoform X7

    Conserved Domains (1) summary
    cd07920
    Location:496 → 817
    Pumilio; Pumilio-family RNA binding domain

  10. XM_028831947.1 → XP_028687780.1  pumilio homolog 2 isoform X3

    UniProtKB/TrEMBL
    H9Z701
    Conserved Domains (1) summary
    cd07920
    Location:666 → 989
    Pumilio; Pumilio-family RNA binding domain

  11. XM_015111784.2 → XP_014967270.1  pumilio homolog 2 isoform X3

    UniProtKB/TrEMBL
    H9Z701
    Conserved Domains (1) summary
    cd07920
    Location:666 → 989
    Pumilio; Pumilio-family RNA binding domain

  12. XM_015111785.2 → XP_014967271.1  pumilio homolog 2 isoform X3

    UniProtKB/TrEMBL
    H9Z701
    Conserved Domains (1) summary
    cd07920
    Location:666 → 989
    Pumilio; Pumilio-family RNA binding domain
Nucleotide Protein
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