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ARID4A AT-rich interaction domain 4A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702688, updated on 17-Aug-2024

Summary

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Official Symbol
ARID4Aprovided by VGNC
Official Full Name
AT-rich interaction domain 4Aprovided by VGNC
Primary source
VGNC:VGNC:70034
See related
Ensembl:ENSMMUG00000003514
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ARID4A in Genome Data Viewer
Location:
chromosome: 7
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (120392731..120468836)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (120274016..120350172)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit alpha 3 Neighboring gene high mobility group protein B1-like Neighboring gene translocase of outer mitochondrial membrane 20 like Neighboring gene translocase of inner mitochondrial membrane 9 Neighboring gene KIAA0586 Neighboring gene heat shock factor-binding protein 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 4A
Names
AT rich interactive domain 4A (RBP1-like)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    120392731..120468836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015143782.2 → XP_014999268.1  AT-rich interactive domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    F7E2A1
    Conserved Domains (4) summary
    smart00501
    Location:312 → 401
    BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain
    smart00333
    Location:58 → 113
    TUDOR; Tudor domain
    pfam08169
    Location:171 → 261
    RBB1NT; RBB1NT (NUC162) domain
    pfam11717
    Location:575 → 629
    Tudor-knot; RNA binding activity-knot of a chromodomain

  2. XM_015143784.2 → XP_014999270.1  AT-rich interactive domain-containing protein 4A isoform X2

    UniProtKB/TrEMBL
    F7E2A1, F7E2A7, H9FY01
    Related
    ENSMMUP00000004681.4, ENSMMUT00000004971.4
    Conserved Domains (4) summary
    smart00501
    Location:312 → 401
    BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain
    smart00333
    Location:58 → 113
    TUDOR; Tudor domain
    pfam08169
    Location:171 → 261
    RBB1NT; RBB1NT (NUC162) domain
    pfam11717
    Location:575 → 629
    Tudor-knot; RNA binding activity-knot of a chromodomain

  3. XM_015143783.2 → XP_014999269.1  AT-rich interactive domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    F7E2A1
    Conserved Domains (4) summary
    smart00501
    Location:312 → 401
    BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain
    smart00333
    Location:58 → 113
    TUDOR; Tudor domain
    pfam08169
    Location:171 → 261
    RBB1NT; RBB1NT (NUC162) domain
    pfam11717
    Location:575 → 629
    Tudor-knot; RNA binding activity-knot of a chromodomain
Nucleotide Protein
Heading Accession and Version

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