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2810408A11Rik RIKEN cDNA 2810408A11 gene [ Mus musculus (house mouse) ]

Gene ID: 70419, updated on 2-Nov-2024

Summary

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Official Symbol
2810408A11Rikprovided by MGI
Official Full Name
RIKEN cDNA 2810408A11 geneprovided by MGI
Primary source
MGI:MGI:1917669
See related
Ensembl:ENSMUSG00000018570 AllianceGenome:MGI:1917669
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700019L01Rik; 4930470J18Rik
Summary
Predicted to enable protein phosphatase inhibitor activity. Predicted to be involved in intracellular signal transduction. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 34.3), CNS E11.5 (RPKM 3.3) and 4 other tissues See more
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Genomic context

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See 2810408A11Rik in Genome Data Viewer
Location:
11 B3; 11 42.92 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (69788178..69791867, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (69897352..69901039, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_29868 Neighboring gene potassium channel tetramerisation domain containing 11 Neighboring gene microRNA 6924 Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:69708255-69708446 Neighboring gene STARR-positive B cell enhancer ABC_E7007 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:69715057-69715244 Neighboring gene neuralized E3 ubiquitin protein ligase 4 Neighboring gene STARR-positive B cell enhancer ABC_E5243 Neighboring gene G protein pathway suppressor 2 Neighboring gene eukaryotic translation initiation factor 5A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. Magdaleno S, et al. PLoS Biol, 2006 Apr. PMID 16602821, Free PMC Article
  2. Genetic determinants of micronucleus formation in vivo. Adams DJ, et al. Nature, 2024 Mar. PMID 38355793, Free PMC Article
  3. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  5. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein phosphatase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
protein phosphatase inhibitor 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001316696.2 → NP_001303625.1  protein phosphatase inhibitor 2-like isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL596185
    Consensus CDS
    CCDS83828.1
    UniProtKB/TrEMBL
    B1AR42, Q9CZ35
    Related
    ENSMUSP00000018714.7, ENSMUST00000018714.13
    Conserved Domains (1) summary
    pfam04979
    Location:153 → 258
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  2. NM_001316697.2 → NP_001303626.1  protein phosphatase inhibitor 2-like isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL596185
    Consensus CDS
    CCDS83827.1
    UniProtKB/TrEMBL
    B1AR39, Q9CZ35
    Related
    ENSMUSP00000098529.3, ENSMUST00000100969.9
    Conserved Domains (1) summary
    pfam04979
    Location:153 → 253
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  3. NM_001316698.2 → NP_001303627.1  protein phosphatase inhibitor 2-like isoform 4

    Status: VALIDATED

    Source sequence(s)
    AL596185
    UniProtKB/TrEMBL
    Q3TAR5
    Conserved Domains (1) summary
    pfam04979
    Location:31 → 136
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  4. NM_001363161.1 → NP_001350090.1  protein phosphatase inhibitor 2-like isoform 5

    Status: VALIDATED

    Source sequence(s)
    AK013042, AL596185
    UniProtKB/TrEMBL
    Q9CZ35
    Related
    ENSMUST00000137122.8
    Conserved Domains (1) summary
    pfam04979
    Location:153 → 268
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  5. NM_001382460.1 → NP_001369389.1  protein phosphatase inhibitor 2-like isoform 6

    Status: VALIDATED

    Source sequence(s)
    AL596185
    UniProtKB/TrEMBL
    A0JLP5
    Conserved Domains (1) summary
    pfam04979
    Location:31 → 146
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  6. NM_001382461.1 → NP_001369390.1  protein phosphatase inhibitor 2-like isoform 7

    Status: VALIDATED

    Source sequence(s)
    AL596185
    UniProtKB/TrEMBL
    B1AR44
    Conserved Domains (1) summary
    pfam04979
    Location:153 → 268
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  7. NM_001382462.1 → NP_001369391.1  protein phosphatase inhibitor 2-like isoform 8

    Status: VALIDATED

    Source sequence(s)
    AL596185
    UniProtKB/TrEMBL
    Q9CZ35
    Conserved Domains (1) summary
    pfam04979
    Location:153 → 268
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  8. NM_001382463.1 → NP_001369392.1  protein phosphatase inhibitor 2-like isoform 9

    Status: VALIDATED

    Source sequence(s)
    AL596185
    UniProtKB/TrEMBL
    Q05BD3
    Conserved Domains (1) summary
    pfam04979
    Location:153 → 289
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  9. NM_027419.4 → NP_081695.2  protein phosphatase inhibitor 2-like isoform 1

    See identical proteins and their annotated locations for NP_081695.2

    Status: VALIDATED

    Source sequence(s)
    AL596185
    Consensus CDS
    CCDS24920.1
    UniProtKB/TrEMBL
    Q6NSU2, Q9CZ35
    Related
    ENSMUSP00000099640.4, ENSMUST00000102580.10
    Conserved Domains (1) summary
    pfam04979
    Location:153 → 258
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    69788178..69791867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036156980.1 → XP_036012873.1  protein phosphatase inhibitor 2-like isoform X2

    Conserved Domains (1) summary
    pfam04979
    Location:153 → 289
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  2. XM_036156981.1 → XP_036012874.1  protein phosphatase inhibitor 2-like isoform X3

    UniProtKB/TrEMBL
    A0JLP5
    Conserved Domains (1) summary
    pfam04979
    Location:31 → 146
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

  3. XM_011249246.4 → XP_011247548.1  protein phosphatase inhibitor 2-like isoform X1

    See identical proteins and their annotated locations for XP_011247548.1

    UniProtKB/TrEMBL
    B1AR44
    Conserved Domains (1) summary
    pfam04979
    Location:153 → 268
    IPP-2; Protein phosphatase inhibitor 2 (IPP-2)

RNA

  1. XR_004937023.1 RNA Sequence

  2. XR_004937022.1 RNA Sequence

  3. XR_004937021.1 RNA Sequence

  4. XR_003949504.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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