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SJAG_00540 elongin-A [ Schizosaccharomyces japonicus yFS275 ]

Gene ID: 7051238, updated on 17-May-2024

Summary

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Gene symbol
SJAG_00540
Gene description
elongin-A
Locus tag
SJAG_00540
See related
FungiDB:SJAG_00540; VEuPathDB:SJAG_00540
Gene type
protein coding
RNA name
elongin-A
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces japonicus yFS275 (strain: yFS275)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SJAG_00540 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_011627860.1Genomic Context describing neighboring genes Neighboring gene PWWP domain-containing protein Pdp1 Neighboring gene carboxylic acid transporter Neighboring gene 40S ribosomal protein S9 Neighboring gene F1-ATPase subunit H Neighboring gene AAA family ATPase Gcn20 Neighboring gene U2 snRNP-associated protein Sf3b14 Neighboring gene CGI-48 family protein Neighboring gene Swr1 complex subunit Vps71

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011627860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by JaponicusDB

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
  
enables transcription elongation factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of elongin complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
elongin-A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011627860.1 Reference assembly

    Range
    3156681..3157870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002171783.2 → XP_002171819.1  elongin-A [Schizosaccharomyces japonicus yFS275]

    See identical proteins and their annotated locations for XP_002171819.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B6JVX5
    Conserved Domains (1) summary
    pfam06881
    Location:21 → 123
    Elongin_A; RNA polymerase II transcription factor SIII (Elongin) subunit A
Nucleotide Protein
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