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SJAG_00541 AAA family ATPase Gcn20 [ Schizosaccharomyces japonicus yFS275 ]

Gene ID: 7051239, updated on 17-May-2024

Summary

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Gene symbol
SJAG_00541
Gene description
AAA family ATPase Gcn20
Locus tag
SJAG_00541
See related
FungiDB:SJAG_00541; VEuPathDB:SJAG_00541
Gene type
protein coding
RNA name
AAA family ATPase Gcn20
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces japonicus yFS275 (strain: yFS275)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SJAG_00541 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_011627860.1Genomic Context describing neighboring genes Neighboring gene PWWP domain-containing protein Pdp1 Neighboring gene carboxylic acid transporter Neighboring gene 40S ribosomal protein S9 Neighboring gene F1-ATPase subunit H Neighboring gene elongin-A Neighboring gene U2 snRNP-associated protein Sf3b14 Neighboring gene CGI-48 family protein Neighboring gene Swr1 complex subunit Vps71

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011627860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by JaponicusDB

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translational elongation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytosol IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosolic ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
AAA family ATPase Gcn20

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011627860.1 Reference assembly

    Range
    3154342..3156709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002171784.2 → XP_002171820.2  AAA family ATPase Gcn20 [Schizosaccharomyces japonicus yFS275]

    See identical proteins and their annotated locations for XP_002171820.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B6JVX6
    Conserved Domains (4) summary
    cd03221
    Location:530 → 722
    ABCF_EF-3; ATP-binding cassette domain of elongation factor 3, subfamily F
    COG0488
    Location:194 → 735
    Uup; ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
    pfam12848
    Location:434 → 519
    ABC_tran_Xtn; ABC transporter
    pfam13207
    Location:222 → 307
    AAA_17; AAA domain
Nucleotide Protein
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