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SJAG_00545 PWWP domain-containing protein Pdp1 [ Schizosaccharomyces japonicus yFS275 ]

Gene ID: 7051243, updated on 17-May-2024

Summary

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Gene symbol
SJAG_00545
Gene description
PWWP domain-containing protein Pdp1
Locus tag
SJAG_00545
See related
FungiDB:SJAG_00545; VEuPathDB:SJAG_00545
Gene type
protein coding
RNA name
PWWP domain-containing protein Pdp1
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces japonicus yFS275 (strain: yFS275)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SJAG_00545 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_011627860.1Genomic Context describing neighboring genes Neighboring gene inorganic phosphate transporter Neighboring gene ubiquitin carboxy terminal hydrolase Ubp9 Neighboring gene carboxylic acid transporter Neighboring gene 40S ribosomal protein S9 Neighboring gene F1-ATPase subunit H Neighboring gene AAA family ATPase Gcn20 Neighboring gene elongin-A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011627860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by JaponicusDB

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of NuA3 histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
PWWP domain-containing protein Pdp1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011627860.1 Reference assembly

    Range
    3149110..3151429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002171788.2 → XP_002171824.2  PWWP domain-containing protein Pdp1 [Schizosaccharomyces japonicus yFS275]

    See identical proteins and their annotated locations for XP_002171824.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B6JVY0
    Conserved Domains (1) summary
    cl02554
    Location:53 → 151
    PWWP; The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids. The PWWP domain is found in numerous proteins that are involved in cell division, growth and differentiation. Most PWWP-domain proteins ...
Nucleotide Protein
Heading Accession and Version

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