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SJAG_00546 ubiquitin carboxy terminal hydrolase Ubp9 [ Schizosaccharomyces japonicus yFS275 ]

Gene ID: 7051244, updated on 17-May-2024

Summary

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Gene symbol
SJAG_00546
Gene description
ubiquitin carboxy terminal hydrolase Ubp9
Locus tag
SJAG_00546
See related
FungiDB:SJAG_00546; VEuPathDB:SJAG_00546
Gene type
protein coding
RNA name
ubiquitin carboxy terminal hydrolase Ubp9
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces japonicus yFS275 (strain: yFS275)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SJAG_00546 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_011627860.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase I Neighboring gene inorganic phosphate transporter Neighboring gene PWWP domain-containing protein Pdp1 Neighboring gene carboxylic acid transporter Neighboring gene 40S ribosomal protein S9 Neighboring gene F1-ATPase subunit H

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011627860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by JaponicusDB

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal-dependent deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cell division site IEA
Inferred from Electronic Annotation
more info
  
is_active_in cell tip IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
ubiquitin carboxy terminal hydrolase Ubp9

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011627860.1 Reference assembly

    Range
    3147020..3149009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002171789.1 → XP_002171825.1  ubiquitin carboxy terminal hydrolase Ubp9 [Schizosaccharomyces japonicus yFS275]

    See identical proteins and their annotated locations for XP_002171825.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B6JVY1
    Conserved Domains (2) summary
    cd02663
    Location:155 → 425
    Peptidase_C19G; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:41 → 424
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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