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5730416F02Rik RIKEN cDNA 5730416F02 gene [ Mus musculus (house mouse) ]

Gene ID: 70550, updated on 2-Nov-2024

Summary

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Official Symbol
5730416F02Rikprovided by MGI
Official Full Name
RIKEN cDNA 5730416F02 geneprovided by MGI
Primary source
MGI:MGI:1917800
See related
Ensembl:ENSMUSG00000081793 AllianceGenome:MGI:1917800
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Acts upstream of or within response to wounding. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See 5730416F02Rik in Genome Data Viewer
Location:
X D; X 47.92 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (108045091..108045902)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (109001485..109002296)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene bromodomain and WD repeat domain containing 3 Neighboring gene RIKEN cDNA 2810403D21 gene Neighboring gene STARR-positive B cell enhancer ABC_E5735 Neighboring gene predicted gene, 23322 Neighboring gene high-mobility group nucleosome binding domain 5 Neighboring gene predicted gene, 25797

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of candidate long non-coding RNAs in response to myocardial infarction. Zangrando J, et al. BMC Genomics, 2014 Jun 10. PMID 24917243, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • capping protein (actin filament), gelsolin-like pseudogene

Gene Ontology Provided by MGI

Process Evidence Code Pubs
acts_upstream_of_or_within response to wounding IEP
Inferred from Expression Pattern
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033596.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL954348
    Related
    ENSMUST00000120648.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    108045091..108045902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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