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VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 706315, updated on 17-Aug-2024

Summary

Official Symbol
VIPAS39provided by VGNC
Official Full Name
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homologprovided by VGNC
Primary source
VGNC:VGNC:79246
Locus tag
EGK_18419
See related
Ensembl:ENSMMUG00000013551
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
VIPAR; VPS16A; C7H14orf133
Orthologs
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Genomic context

See VIPAS39 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
21
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (139542124..139574280, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (139862867..139895147, complement)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene transmembrane p24 trafficking protein family member 8 Neighboring gene sterile alpha motif domain containing 15 Neighboring gene NADP dependent oxidoreductase domain containing 1 Neighboring gene activator of HSP90 ATPase activity 1 Neighboring gene isthmin 2

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
spermatogenesis-defective protein 39 homolog
Names
VPS33B-interacting protein
vacuolar protein sorting 16 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260519.2NP_001247448.1  spermatogenesis-defective protein 39 homolog

    See identical proteins and their annotated locations for NP_001247448.1

    Status: PROVISIONAL

    Source sequence(s)
    JV047895
    UniProtKB/TrEMBL
    A0A5S6RB82, A0A8J8XF23, F7FS14, G7MYW8, H9FYA8
    Related
    ENSMMUP00000017819.4, ENSMMUT00000019024.4
    Conserved Domains (1) summary
    pfam09787
    Location:26471
    Golgin_A5; Golgin subfamily A member 5

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    139542124..139574280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015144181.2XP_014999667.1  spermatogenesis-defective protein 39 homolog isoform X1

    UniProtKB/TrEMBL
    H9FYA8
    Conserved Domains (1) summary
    pfam09787
    Location:30475
    Golgin_A5; Golgin subfamily A member 5