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ZBED3 zinc finger BED-type containing 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707787, updated on 17-Aug-2024

Summary

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Official Symbol
ZBED3provided by VGNC
Official Full Name
zinc finger BED-type containing 3provided by VGNC
Primary source
VGNC:VGNC:79271
See related
Ensembl:ENSMMUG00000021357
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ZBED3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (73901528..73911621, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (73749976..73760061, complement)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene corticotropin releasing hormone binding protein Neighboring gene small nucleolar RNA SNORA47 Neighboring gene angiogenic factor with G-patch and FHA domains 1 Neighboring gene phosphodiesterase 8B Neighboring gene uncharacterized LOC114678825 Neighboring gene WD repeat domain 41 Neighboring gene 60S ribosomal protein L23a pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger BED domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001285796.2 → NP_001272725.2  zinc finger BED domain-containing protein 3

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000391
    UniProtKB/TrEMBL
    F7DG84
    Related
    ENSMMUP00000028133.3, ENSMMUT00000030061.4
    Conserved Domains (1) summary
    smart00614
    Location:45 → 98
    ZnF_BED; BED zinc finger

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    73901528..73911621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials