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Krtap7-1 keratin associated protein 7-1 [ Mus musculus (house mouse) ]

Gene ID: 71363, updated on 2-Nov-2024

Summary

Official Symbol
Krtap7-1provided by MGI
Official Full Name
keratin associated protein 7-1provided by MGI
Primary source
MGI:MGI:1918613
See related
Ensembl:ENSMUSG00000056706 AllianceGenome:MGI:1918613
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
5430433J05Rik
Summary
Predicted to be located in intermediate filament. Orthologous to human KRTAP7-1 (keratin associated protein 7-1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Krtap7-1 in Genome Data Viewer
Location:
16 C3.3; 16 51.42 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (89304591..89305211, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (89507703..89508323, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23655 Neighboring gene keratin associated protein 8-1 Neighboring gene STARR-seq mESC enhancer starr_41421 Neighboring gene keratin associated protein 11-1 Neighboring gene STARR-seq mESC enhancer starr_41422 Neighboring gene cyclin G1 pseudogene

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
keratin-associated protein 7-1
Names
high glycine-tyrosine keratin-associated protein 7.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027771.1NP_082047.1  keratin-associated protein 7-1

    See identical proteins and their annotated locations for NP_082047.1

    Status: VALIDATED

    Source sequence(s)
    AK017387, CB320982
    Consensus CDS
    CCDS49902.1
    UniProtKB/Swiss-Prot
    Q9D3I6
    Related
    ENSMUSP00000054720.3, ENSMUST00000056118.4
    Conserved Domains (1) summary
    pfam15034
    Location:184
    KRTAP7; KRTAP type 7 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    89304591..89305211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)