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LOC714689 nuclear factor NF-kappa-B p100 subunit [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714689, updated on 9-Nov-2023

Summary

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Gene symbol
LOC714689
Gene description
nuclear factor NF-kappa-B p100 subunit
See related
Ensembl:ENSMMUG00000002990
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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Genomic context

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See LOC714689 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 Unlocalized Scaffold NW_021160234.1 (40453..48445, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (98110785..98118760)

NW_021160234.1Genomic Context describing neighboring genes Neighboring gene CUE domain containing 2 Neighboring gene F-box and leucine rich repeat protein 15 Neighboring gene PH and SEC7 domain-containing protein 1 Neighboring gene Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to cytokine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear factor NF-kappa-B p100 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NW_021160234.1 Reference Mmul_10 Primary Assembly

    Range
    40453..48445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015148078.2 → XP_015003564.2  nuclear factor NF-kappa-B p100 subunit isoform X4

    UniProtKB/TrEMBL
    F7GVV0, H9YVH7
    Related
    ENSMMUP00000003997.4, ENSMMUT00000004237.4
    Conserved Domains (5) summary
    cd07934
    Location:38 → 221
    RHD-n_NFkB2; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor kappa B2 (NF-kappa B2)
    cd08798
    Location:774 → 849
    Death_NFkB2_p100; Death domain of the Nuclear Factor-KappaB2 precursor protein p100
    PHA03095
    Location:459 → 705
    PHA03095; ankyrin-like protein; Provisional
    cd01177
    Location:228 → 327
    IPT_NFkappaB; IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to ...
    sd00045
    Location:599 → 630
    ANK; ANK repeat [structural motif]

  2. XM_015148077.2 → XP_015003563.2  nuclear factor NF-kappa-B p100 subunit isoform X4

    UniProtKB/TrEMBL
    F7GVV0, H9YVH7
    Conserved Domains (5) summary
    cd07934
    Location:38 → 221
    RHD-n_NFkB2; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor kappa B2 (NF-kappa B2)
    cd08798
    Location:774 → 849
    Death_NFkB2_p100; Death domain of the Nuclear Factor-KappaB2 precursor protein p100
    PHA03095
    Location:459 → 705
    PHA03095; ankyrin-like protein; Provisional
    cd01177
    Location:228 → 327
    IPT_NFkappaB; IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to ...
    sd00045
    Location:599 → 630
    ANK; ANK repeat [structural motif]

  3. XM_015148076.2 → XP_015003562.2  nuclear factor NF-kappa-B p100 subunit isoform X3

    UniProtKB/TrEMBL
    A0A5S6R7A9, A0A8J8XDC2, F7GVU6, F7GVV0, G7N104
    Related
    ENSMMUP00000003998.4, ENSMMUT00000004238.4
    Conserved Domains (5) summary
    cd07934
    Location:38 → 221
    RHD-n_NFkB2; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor kappa B2 (NF-kappa B2)
    cd08798
    Location:774 → 849
    Death_NFkB2_p100; Death domain of the Nuclear Factor-KappaB2 precursor protein p100
    PHA03095
    Location:459 → 705
    PHA03095; ankyrin-like protein; Provisional
    cd01177
    Location:228 → 327
    IPT_NFkappaB; IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to ...
    sd00045
    Location:599 → 630
    ANK; ANK repeat [structural motif]

  4. XM_015148075.2 → XP_015003561.2  nuclear factor NF-kappa-B p100 subunit isoform X2

    UniProtKB/TrEMBL
    F7GVV0
    Conserved Domains (5) summary
    cd08798
    Location:781 → 856
    Death_NFkB2_p100; Death domain of the Nuclear Factor-KappaB2 precursor protein p100
    PHA03095
    Location:466 → 712
    PHA03095; ankyrin-like protein; Provisional
    cd01177
    Location:235 → 334
    IPT_NFkappaB; IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to ...
    sd00045
    Location:606 → 637
    ANK; ANK repeat [structural motif]
    cl08275
    Location:55 → 228
    RHD-n; N-terminal sub-domain of the Rel homology domain (RHD)

  5. XM_015148074.2 → XP_015003560.2  nuclear factor NF-kappa-B p100 subunit isoform X1

    UniProtKB/TrEMBL
    F7GVV0
    Conserved Domains (5) summary
    cd08798
    Location:781 → 856
    Death_NFkB2_p100; Death domain of the Nuclear Factor-KappaB2 precursor protein p100
    PHA03095
    Location:466 → 712
    PHA03095; ankyrin-like protein; Provisional
    cd01177
    Location:235 → 334
    IPT_NFkappaB; IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to ...
    sd00045
    Location:606 → 637
    ANK; ANK repeat [structural motif]
    cl08275
    Location:55 → 228
    RHD-n; N-terminal sub-domain of the Rel homology domain (RHD)
Nucleotide Protein
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