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PHIP pleckstrin homology domain interacting protein [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716810, updated on 17-Aug-2024

Summary

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Official Symbol
PHIPprovided by VGNC
Official Full Name
pleckstrin homology domain interacting proteinprovided by VGNC
Primary source
VGNC:VGNC:75803
See related
Ensembl:ENSMMUG00000017186
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PHIP in Genome Data Viewer
Location:
chromosome: 4
Exon count:
41
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (93985601..94123334)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (77148607..77292730, complement)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene ADP/ATP translocase 2-like Neighboring gene dnaJ homolog subfamily B member 6-like Neighboring gene high mobility group nucleosomal binding domain 3 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene interleukin 1 receptor associated kinase 1 binding protein 1 Neighboring gene uncharacterized LOC106998005

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PH-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    93985601..94123334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015136812.2 → XP_014992298.1  PH-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5R3B0, F7HIM2, H9FWE9
    Related
    ENSMMUP00000054796.2, ENSMMUT00000071177.2
    Conserved Domains (4) summary
    cd05496
    Location:1316 → 1434
    Bromo_WDR9_II; Bromodomain; WDR9 repeat II_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional ...
    cd05529
    Location:1148 → 1263
    Bromo_WDR9_I_like; Bromodomain; WDR9 repeat I_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional ...
    cd00200
    Location:175 → 495
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:186 → 223
    7WD40; WD40 repeat [structural motif]

  2. XM_015136813.2 → XP_014992299.1  PH-interacting protein isoform X2

    UniProtKB/TrEMBL
    F7HIM2
    Conserved Domains (4) summary
    cd05496
    Location:1315 → 1433
    Bromo_WDR9_II; Bromodomain; WDR9 repeat II_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional ...
    cd05529
    Location:1147 → 1262
    Bromo_WDR9_I_like; Bromodomain; WDR9 repeat I_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional ...
    cd00200
    Location:175 → 495
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:186 → 223
    7WD40; WD40 repeat [structural motif]

  3. XM_015136814.2 → XP_014992300.1  PH-interacting protein isoform X3

    UniProtKB/TrEMBL
    F7HIM2
    Conserved Domains (5) summary
    cd05496
    Location:1144 → 1262
    Bromo_WDR9_II; Bromodomain; WDR9 repeat II_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional ...
    cd05529
    Location:976 → 1091
    Bromo_WDR9_I_like; Bromodomain; WDR9 repeat I_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains, which may function as a transcriptional ...
    COG2319
    Location:6 → 366
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:3 → 323
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:14 → 51
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
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