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RTEL1 regulator of telomere elongation helicase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 719519, updated on 17-Aug-2024

Summary

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Official Symbol
RTEL1provided by VGNC
Official Full Name
regulator of telomere elongation helicase 1provided by VGNC
Primary source
VGNC:VGNC:108030
See related
Ensembl:ENSMMUG00000000167
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
TNFRSF6B
Orthologs
human mouse all
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Genomic context

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See RTEL1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
36
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (98868333..98905830)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (604015..644860, complement)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene glucocorticoid modulatory element binding protein 2 Neighboring gene spidroin-1-like Neighboring gene stathmin 3 Neighboring gene TNF receptor superfamily member 6b Neighboring gene ADP ribosylation factor related protein 1 Neighboring gene zinc finger CCCH-type and G-patch domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA polymerase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA duplex unwinding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of t-circle formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomeric loop disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulator of telomere elongation helicase 1
Names
tumor necrosis factor receptor superfamily member 6B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    98868333..98905830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028828729.1 → XP_028684562.1  regulator of telomere elongation helicase 1 isoform X2

    UniProtKB/TrEMBL
    F7HLS3
    Related
    ENSMMUP00000000233.4, ENSMMUT00000000246.4
    Conserved Domains (3) summary
    PRK07764
    Location:931 → 1192
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd13932
    Location:829 → 928
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 694
    rad3; DNA repair helicase (rad3)

  2. XM_028828726.1 → XP_028684559.1  regulator of telomere elongation helicase 1 isoform X1

    UniProtKB/TrEMBL
    F7HLR9
    Conserved Domains (3) summary
    PRK07764
    Location:980 → 1241
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd13932
    Location:878 → 977
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 743
    rad3; DNA repair helicase (rad3)

  3. XM_028828730.1 → XP_028684563.1  regulator of telomere elongation helicase 1 isoform X3

    UniProtKB/TrEMBL
    A0A5F7Z874, A0A5F7ZU94
    Related
    ENSMMUP00000069191.1, ENSMMUT00000100437.1
    Conserved Domains (3) summary
    PRK07764
    Location:980 → 1231
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd13932
    Location:878 → 977
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 743
    rad3; DNA repair helicase (rad3)

  4. XM_028828731.1 → XP_028684564.1  regulator of telomere elongation helicase 1 isoform X4

    UniProtKB/TrEMBL
    A0A5F7Z874
    Related
    ENSMMUP00000072139.1, ENSMMUT00000082662.1
    Conserved Domains (2) summary
    cd13932
    Location:878 → 977
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 743
    rad3; DNA repair helicase (rad3)

  5. XM_028828728.1 → XP_028684561.1  regulator of telomere elongation helicase 1 isoform X1

    UniProtKB/TrEMBL
    F7HLR9
    Conserved Domains (3) summary
    PRK07764
    Location:980 → 1241
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd13932
    Location:878 → 977
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 743
    rad3; DNA repair helicase (rad3)

  6. XM_028828727.1 → XP_028684560.1  regulator of telomere elongation helicase 1 isoform X1

    UniProtKB/TrEMBL
    F7HLR9
    Related
    ENSMMUP00000000235.4, ENSMMUT00000000248.4
    Conserved Domains (3) summary
    PRK07764
    Location:980 → 1241
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd13932
    Location:878 → 977
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:13 → 743
    rad3; DNA repair helicase (rad3)

  7. XM_028828734.1 → XP_028684567.1  regulator of telomere elongation helicase 1 isoform X5

    Conserved Domains (3) summary
    PRK07764
    Location:671 → 932
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd13932
    Location:569 → 668
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:143 → 434
    rad3; DNA repair helicase (rad3)

  8. XM_028828732.1 → XP_028684565.1  regulator of telomere elongation helicase 1 isoform X5

    Conserved Domains (3) summary
    PRK07764
    Location:671 → 932
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd13932
    Location:569 → 668
    HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
    TIGR00604
    Location:143 → 434
    rad3; DNA repair helicase (rad3)
Nucleotide Protein
Heading Accession and Version

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