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Snhg7 small nucleolar RNA host gene 7 [ Mus musculus (house mouse) ]

Gene ID: 72091, updated on 17-Aug-2024

Summary

Official Symbol
Snhg7provided by MGI
Official Full Name
small nucleolar RNA host gene 7provided by MGI
Primary source
MGI:MGI:1919341
See related
Ensembl:ENSMUSG00000120369 AllianceGenome:MGI:1919341
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2610002F03Rik
Summary
Orthologous to human SNHG7 (small nucleolar RNA host gene 7). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E14 (RPKM 13.9), limb E14.5 (RPKM 13.5) and 28 other tissues See more
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Genomic context

See Snhg7 in Genome Data Viewer
Location:
2 A3; 2 18.98 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (26527188..26530256, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (26637176..26640244, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_03989 Neighboring gene predicted gene, 39772 Neighboring gene divergent protein kinase domain 1B Neighboring gene STARR-seq mESC enhancer starr_03992 Neighboring gene small nucleolar RNA, H/ACA box 43 Neighboring gene small nucleolar RNA, H/ACA box 17 Neighboring gene small nucleolar RNA host gene 7, opposite strand Neighboring gene STARR-positive B cell enhancer ABC_E3364 Neighboring gene predicted gene 2240

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • small nucleolar RNA host gene (non-protein coding) 7

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024068.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK011283, CB245554
    Related
    ENSMUST00000242822.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    26527188..26530256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)