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KE627_RS08650 YbaK/EbsC family protein [ Lentilactobacillus buchneri ]

Gene ID: 72461588, updated on 22-May-2024

Summary

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Gene symbol
KE627_RS08650
Gene description
YbaK/EbsC family protein
Locus tag
KE627_RS08650
Gene type
protein coding
Organism
Lentilactobacillus buchneri (strain: ATCC 4005, culture-collection: ATCC:4005, type-material: type strain of Lactobacillus buchneri)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus
Old locus tag
KE627_08650
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Genomic context

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NZ_CP073066.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene sigma-70 family RNA polymerase sigma factor Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP073066.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substrate-mediated fidelity mechanism ensures accurate decoding of proline codons. So BR, et al. J Biol Chem, 2011 Sep 9. PMID 21768119, Free PMC Article
  2. Structures of two bacterial prolyl-tRNA synthetases with and without a cis-editing domain. Crepin T, et al. Structure, 2006 Oct. PMID 17027500
  3. The bacterial YbaK protein is a Cys-tRNAPro and Cys-tRNA Cys deacylase. Ruan B, et al. J Biol Chem, 2005 Jul 8. PMID 15886196
  4. Trans-editing of mischarged tRNAs. Ahel I, et al. Proc Natl Acad Sci U S A, 2003 Dec 23. PMID 14663147, Free PMC Article
  5. Cys-tRNA(Pro) editing by Haemophilus influenzae YbaK via a novel synthetase.YbaK.tRNA ternary complex. An S, et al. J Biol Chem, 2005 Oct 14. PMID 16087664

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
YbaK/EbsC family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP073066.1 Reference assembly

    Range
    1843391..1843876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_013727380.1 YbaK/EbsC family protein [Lentilactobacillus buchneri]

    See identical proteins and their annotated locations for WP_013727380.1

    UniProtKB/TrEMBL
    A0A4R5NU44
    Conserved Domains (1) summary
    cl00022
    Location:6 → 160
    YbaK_like; YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, ProX, and PrdX. The primary function of INS is to hydrolyze ...
Nucleotide Protein
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