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Ier5l immediate early response 5-like [ Mus musculus (house mouse) ]

Gene ID: 72500, updated on 2-Nov-2024

Summary

Official Symbol
Ier5lprovided by MGI
Official Full Name
immediate early response 5-likeprovided by MGI
Primary source
MGI:MGI:1919750
See related
Ensembl:ENSMUSG00000089762 AllianceGenome:MGI:1919750
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2610524G09Rik
Summary
Is expressed in several structures, including alimentary system; brain ventricular layer; hindlimb phalanx; salivary gland primordium; and sensory organ. Orthologous to human IER5L (immediate early response 5 like). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Ier5l in Genome Data Viewer
Location:
2 B; 2 21.71 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (30362643..30364211, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (30472631..30474199, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene dolichyl pyrophosphate phosphatase 1 Neighboring gene carnitine acetyltransferase Neighboring gene protein phosphatase 2 protein activator Neighboring gene STARR-positive B cell enhancer ABC_E5903 Neighboring gene STARR-seq mESC enhancer starr_04096 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:30319437-30319638 Neighboring gene STARR-positive B cell enhancer ABC_E1584 Neighboring gene STARR-positive B cell enhancer ABC_E3367 Neighboring gene predicted gene, 31291 Neighboring gene predicted gene, 39781

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
immediate early response gene 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_030244.3NP_084520.3  immediate early response gene 5-like protein

    See identical proteins and their annotated locations for NP_084520.3

    Status: PROVISIONAL

    Source sequence(s)
    BC010234
    Consensus CDS
    CCDS38095.1
    UniProtKB/Swiss-Prot
    Q8BTA0, Q8CC26, Q99J55
    Related
    ENSMUSP00000132594.2, ENSMUST00000065134.4
    Conserved Domains (1) summary
    pfam05760
    Location:1406
    IER; Immediate early response protein (IER)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    30362643..30364211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)