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L1P05_RS17225 restriction endonuclease [ Edwardsiella piscicida ]

Gene ID: 72530341, updated on 10-Oct-2024

Summary

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Gene symbol
L1P05_RS17225
Gene description
restriction endonuclease
Locus tag
L1P05_RS17225
Gene type
protein coding
Organism
Edwardsiella piscicida (strain: 18EpOKYJ, nat-host: Paralichthtys olivaceus (Olive flounder))
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Hafniaceae; Edwardsiella
Old locus tag
L1P05_17225
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Genomic context

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Location:
plasmid: unnamed

NZ_CP090969.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene TrbM/KikA/MpfK family conjugal transfer protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP090969.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional predictions for domains of (hitherto) unknown function. Kosinski J, et al. BMC Bioinformatics, 2005 Jul 12. PMID 16011798, Free PMC Article
  2. Identification of novel restriction endonuclease-like fold families among hypothetical proteins. Kinch LN, et al. Nucleic Acids Res, 2005. PMID 15972856, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
restriction endonuclease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP090969.1 Reference assembly

    Range
    9244..9891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015344958.1 MULTISPECIES: restriction endonuclease [Gammaproteobacteria]

    See identical proteins and their annotated locations for WP_015344958.1

    UniProtKB/TrEMBL
    A0A250ME50, A0A343IRE1, A0A6G6ARB7, A0A7G1GA16, A0AAP6FY07, A0AAQ3C610, L0R2W8, L0R4P5
    Conserved Domains (1) summary
    pfam04471
    Location:64 → 174
    Mrr_cat; Restriction endonuclease