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NCOA4P2 nuclear receptor coactivator 4 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 728333, updated on 17-Sep-2024

Summary

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Official Symbol
NCOA4P2provided by HGNC
Official Full Name
nuclear receptor coactivator 4 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:52403
See related
AllianceGenome:HGNC:52403
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See NCOA4P2 in Genome Data Viewer
Location:
4q22.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (88507003..88510487, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (91838659..91842143, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (89428154..89431638, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15563 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21713 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21714 Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 Neighboring gene uncharacterized LOC102723458 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21715 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:89403116-89403280 Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21716 Neighboring gene PIGY divergent transcript Neighboring gene PIGY upstream open reading frame Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 3 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class Y

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009764.1 

    Range
    101..3585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    88507003..88510487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    91838659..91842143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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