U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

UBE3AP2 ubiquitin protein ligase E3A pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 7339, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
UBE3AP2provided by HGNC
Official Full Name
ubiquitin protein ligase E3A pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:12498
See related
AllianceGenome:HGNC:12498
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See UBE3AP2 in Genome Data Viewer
Location:
21q22.11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (31059996..31063168, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (29427740..29430912, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (32432315..32435487, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372774 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_61959 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18351 Neighboring gene keratin associated protein 19-8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18352 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18353 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr21:32530991-32531520 Neighboring gene TIAM Rac1 associated GEF 1 Neighboring gene Sharpr-MPRA regulatory region 15669 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:32554821-32555320 Neighboring gene uncharacterized LOC105372777 Neighboring gene MPRA-validated peak4402 silencer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr21:32710674-32711873 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr21:32738744-32739943 Neighboring gene MPRA-validated peak4404 silencer Neighboring gene ReSE screen-validated silencer GRCh37_chr21:32822900-32823113 Neighboring gene MTRES1 pseudogene 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genomic organization of the UBE3A/E6-AP gene and related pseudogenes. Kishino T, et al. Genomics, 1998 Jan 1. PMID 9465301
  2. The DNA sequence of human chromosome 21. Hattori M, et al. Nature, 2000 May 18. PMID 10830953

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Markers

Other Names

  • ubiquitin protein ligase, processed pseudogene

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001210.3 

    Range
    101..3273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    31059996..31063168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    29427740..29430912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials