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Speer8-ps1 spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 74062, updated on 17-Aug-2024

Summary

Official Symbol
Speer8-ps1provided by MGI
Official Full Name
spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1provided by MGI
Primary source
MGI:MGI:1921312
See related
AllianceGenome:MGI:1921312
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SPEER-8; Speer8-ps; 4933405L09Rik
Expression
Biased expression in testis adult (RPKM 3.3), colon adult (RPKM 0.4) and 4 other tissues See more
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Genomic context

See Speer8-ps1 in Genome Data Viewer
Location:
5 A2; 5 6.47 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (14995308..15028555)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (14945294..14978541)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 52805 Neighboring gene predicted gene 9758 Neighboring gene spermatogenesis associated glutamate (E)-rich protein 4E1 Neighboring gene spermatogenesis associated glutamate (E)-rich protein 4E2 Neighboring gene predicted gene 17019 Neighboring gene predicted gene, 21149

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • sperm-associated glutamate (E)-rich protein 8, pseudogene
  • spermatogenic-associated glutamate (E)-rich protein 8, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001584.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC144480

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    14995308..15028555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)