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Rab10os RAB10, member RAS oncogene family, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 74173, updated on 22-Oct-2024

Summary

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Official Symbol
Rab10osprovided by MGI
Official Full Name
RAB10, member RAS oncogene family, opposite strandprovided by MGI
Primary source
MGI:MGI:1921423
See related
Ensembl:ENSMUSG00000079179 AllianceGenome:MGI:1921423
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700012B15Rik; 1810036A22Rik
Expression
Ubiquitous expression in adrenal adult (RPKM 24.6), testis adult (RPKM 15.9) and 28 other tissues See more
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Genomic context

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See Rab10os in Genome Data Viewer
Location:
12 A1.1; 12 1.71 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (3285791..3300374)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (3235791..3250374)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene NLR family, pyrin domain containing 2 pseudogene Neighboring gene NLR family, pyrin domain containing 5 pseudogene Neighboring gene RAB10, member RAS oncogene family Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:3310165-3310274 Neighboring gene STARR-seq mESC enhancer starr_31404 Neighboring gene STARR-seq mESC enhancer starr_31405 Neighboring gene STARR-seq mESC enhancer starr_31406 Neighboring gene STARR-positive B cell enhancer ABC_E10738 Neighboring gene predicted gene, 26520 Neighboring gene STARR-positive B cell enhancer ABC_E9852 Neighboring gene RIKEN cDNA I920046F24 gene Neighboring gene kinesin family member 3C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. Nakahara M, et al. Mamm Genome, 2013 Jun. PMID 23604909
  2. Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. Taniwaki T, et al. Dev Growth Differ, 2005 Apr. PMID 15840001
  3. Exchangeable gene trap using the Cre/mutated lox system. Araki K, et al. Cell Mol Biol (Noisy-le-grand), 1999 Jul. PMID 10512203
  4. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  5. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • Rab10 opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015551.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK007702
    Related
    ENSMUST00000343962.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    3285791..3300374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_028796.1: Suppressed sequence

    Description
    NM_028796.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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