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4930448K20Rik RIKEN cDNA 4930448K20 gene [ Mus musculus (house mouse) ]

Gene ID: 74662, updated on 28-Oct-2024

Summary

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Official Symbol
4930448K20Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930448K20 geneprovided by MGI
Primary source
MGI:MGI:1921912
See related
Ensembl:ENSMUSG00000121765 AllianceGenome:MGI:1921912
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700009K09Rik
Summary
Is expressed in embryo. [provided by Alliance of Genome Resources, Oct 2024]
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Genomic context

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See 4930448K20Rik in Genome Data Viewer
Location:
4 A1; 4 4.39 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (9915965..9917397, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (9915965..9917397, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930412C18 gene Neighboring gene growth differentiation factor 6 Neighboring gene STARR-seq mESC enhancer starr_09545 Neighboring gene predicted gene, 35008 Neighboring gene STARR-seq mESC enhancer starr_09546 Neighboring gene STARR-seq mESC enhancer starr_09547 Neighboring gene STARR-seq mESC enhancer starr_09548 Neighboring gene STARR-seq mESC enhancer starr_09549 Neighboring gene STARR-seq mESC enhancer starr_09550 Neighboring gene predicted gene, 46879

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • glyceraldehyde-3-phosphate dehydrogenase pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_004448.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL732476
    Related
    ENSMUST00000182072.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    9915965..9917397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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