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Gm26553 predicted gene, 26553 [ Mus musculus (house mouse) ]

Gene ID: 74690, updated on 28-Oct-2024

Summary

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Official Symbol
Gm26553provided by MGI
Official Full Name
predicted gene, 26553provided by MGI
Primary source
MGI:MGI:5477047
See related
AllianceGenome:MGI:5477047
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930459I23Rik
Summary
Is expressed in dorsal grey horn and spinal cord. [provided by Alliance of Genome Resources, Oct 2024]
Expression
Restricted expression toward testis adult (RPKM 5.6) See more
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Genomic context

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See Gm26553 in Genome Data Viewer
Location:
3; 3 F2.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96256903..96264424, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96349587..96357108, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA glutamine 5 (anticodon CTG) Neighboring gene STARR-seq mESC enhancer starr_08422 Neighboring gene pluripotency associated transcript 30 Neighboring gene nuclear encoded tRNA glutamic acid 3 (anticodon TTC) Neighboring gene nuclear encoded tRNA glycine 5 (anticodon CCC) Neighboring gene U1b1 small nuclear RNA Neighboring gene U1b2 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    96256903..96264424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_375861.3 RNA Sequence

  2. XR_375859.3 RNA Sequence

  3. XR_375860.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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